RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 C4orf46Q504U0 113 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 LRTM2Q8N967 370 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 SCARB1Q8WTV0 552 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 PINX1Q96BK5 328 aaKnown RBP17.44■□□□□ 0.38
TDP1-206ENST00000553569 C21orf62Q9NYP8 219 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 TBC1D24Q9ULP9 559 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 OR4E1P0C645 316 aa17.43■□□□□ 0.38
TDP1-206ENST00000553569 PDLIM3Q53GG5 364 aaPredicted RBP17.43■□□□□ 0.38
TDP1-206ENST00000553569 REC114Q7Z4M0 266 aa17.43■□□□□ 0.38
TDP1-206ENST00000553569 HAPLN4Q86UW8 402 aa17.43■□□□□ 0.38
TDP1-206ENST00000553569 UBAC2Q8NBM4 344 aa17.43■□□□□ 0.38
TDP1-206ENST00000553569 OR1S1Q8NH92 325 aa17.43■□□□□ 0.38
TDP1-206ENST00000553569 OR2T8A6NH00 312 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 UPK1BO75841 260 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 HOXB5P09067 269 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 RNASE2P10153 161 aaKnown RBP17.42■□□□□ 0.38
TDP1-206ENST00000553569 DHRS2Q13268 280 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 Q56UQ5 140 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 C11orf87Q6NUJ2 197 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 LYG2Q86SG7 212 aa17.42■□□□□ 0.38
TDP1-206ENST00000553569 HEYLQ9NQ87 328 aaPredicted RBP17.42■□□□□ 0.38
TDP1-206ENST00000553569 TRAV6A0A075B6T7 132 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 A0A1B0GU03 582 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 I3L2K1 104 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 MT-CO2P00403 227 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 IGHV3-48P01763 117 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 TCRBP04435 133 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 SUB1P53999 127 aaKnown RBP eCLIP17.41■□□□□ 0.38
TDP1-206ENST00000553569 MZT2BQ6NZ67 158 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 PLET1Q6UQ28 207 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 COQ8AQ8NI60 647 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 MRAPQ8TCY5 172 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 PEMTQ9UBM1 199 aa17.41■□□□□ 0.38
TDP1-206ENST00000553569 ZMAT5Q9UDW3 170 aaKnown RBP17.41■□□□□ 0.38
TDP1-206ENST00000553569 IGHV3-35A0A0C4DH35 117 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 WI2-2373I1.2A0A1W2PRP0 233 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 TGOLN2O43493 480 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 TNFRSF9Q07011 255 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 ASAH1Q13510 395 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 PRR25Q96S07 402 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 NUDT15Q9NV35 164 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 CACFD1Q9UGQ2 172 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 TMED3Q9Y3Q3 217 aa17.4■□□□□ 0.38
TDP1-206ENST00000553569 FAM240BA0A1B0GVZ2 78 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 F8W735 103 aaPredicted RBP17.39■□□□□ 0.37
TDP1-206ENST00000553569 LY86O95711 162 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 CSN3P07498 182 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 GGNBP1Q5YKI7 109 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 IL34Q6ZMJ4 242 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 OR52B4Q8NGK2 314 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 BSCL2Q96G97 398 aaPredicted RBP17.39■□□□□ 0.37
TDP1-206ENST00000553569 RBKSQ9H477 322 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 HSPB7Q9UBY9 170 aa17.39■□□□□ 0.37
TDP1-206ENST00000553569 ZNF320A2RRD8 509 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 ADAP1O75689 374 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 HTR2BP41595 481 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 FAM106AQ4KMX7 169 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 GPHB5Q86YW7 130 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 SLC24A4Q8NFF2 622 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 HIPK2Q9H2X6 1198 aa17.38■□□□□ 0.37
TDP1-206ENST00000553569 K7EIL1 84 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 CORTO00230 105 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 MFAP4P55083 255 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 IFITM3Q01628 133 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 BSXQ3C1V8 233 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 DTD1Q8TEA8 209 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 CHRDL1Q9BU40 450 aa17.37■□□□□ 0.37
TDP1-206ENST00000553569 ZNF256Q9Y2P7 627 aaPredicted RBP17.37■□□□□ 0.37
TDP1-206ENST00000553569 DNAH3Q8TD57 4116 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 LGALS9O00182 355 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 PITX3O75364 302 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 H2AFB2P0C5Z0 115 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 SLC25A6P12236 298 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 SPNP16150 400 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 EDN2P20800 178 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 OPRK1P41145 380 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 PVRIGQ6DKI7 326 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 SPSB3Q6PJ21 355 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 ENKURQ8TC29 256 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 ATP6V0BQ99437 205 aa17.36■□□□□ 0.37
TDP1-206ENST00000553569 IGLV1-51P01701 117 aa17.35■□□□□ 0.37
TDP1-206ENST00000553569 NPY1RP25929 384 aa17.35■□□□□ 0.37
TDP1-206ENST00000553569 UNQ9165/PRO28630Q6UXU0 137 aa17.35■□□□□ 0.37
TDP1-206ENST00000553569 SEC22CQ9BRL7 303 aa17.35■□□□□ 0.37
TDP1-206ENST00000553569 GAR1Q9NY12 217 aaKnown RBP17.35■□□□□ 0.37
TDP1-206ENST00000553569 C2orf70A6NJV1 201 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 MPTX1A8MV57 137 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 IFNA10P01566 189 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 IFNA21P01568 189 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 ADMP35318 185 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 C2orf83Q53S99 150 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 DUSP18Q8NEJ0 188 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 DYNLRB2Q8TF09 96 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 CACNG8Q8WXS5 425 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 TXN2Q99757 166 aa17.34■□□□□ 0.37
TDP1-206ENST00000553569 ZNF436Q9C0F3 470 aaPredicted RBP17.34■□□□□ 0.37
TDP1-206ENST00000553569 FNDC4Q9H6D8 234 aaPredicted RBP17.34■□□□□ 0.37
TDP1-206ENST00000553569 NUPL2O15504 423 aaKnown RBP17.33■□□□□ 0.36
TDP1-206ENST00000553569 GNG7O60262 68 aa17.33■□□□□ 0.36
TDP1-206ENST00000553569 IAPPP10997 89 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms