RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 TOMM5Q8N4H5 51 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 ZNF114Q8NC26 417 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 OR1L6Q8NGR2 347 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 RBPMSQ93062 196 aaKnown RBP7.72□□□□□ -1.17
LINC00517-201ENST00000553396 TMEM230Q96A57 120 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 BSCL2Q96G97 398 aaPredicted RBP7.72□□□□□ -1.17
LINC00517-201ENST00000553396 CHRDL1Q9BU40 450 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
LINC00517-201ENST00000553396 IGHV3OR16-8A0A075B7F1 116 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 F8W735 103 aaPredicted RBP7.71□□□□□ -1.18
LINC00517-201ENST00000553396 NXPH3O95157 252 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 CD81P60033 236 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 DHODHQ02127 395 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 GUCA2BQ16661 112 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 DEFB114Q30KQ6 69 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 SPANXN2Q5MJ10 180 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 BTNL8Q6UX41 500 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 Q6ZRM9 215 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 CCDC190Q86UF4 302 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 UXS1Q8NBZ7 420 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 WDR89Q96FK6 387 aaPredicted RBP7.71□□□□□ -1.18
LINC00517-201ENST00000553396 ENY2Q9NPA8 101 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 MLXQ9UH92 298 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 U3KQK5 164 aa7.71□□□□□ -1.18
LINC00517-201ENST00000553396 HUWE1Q7Z6Z7 4374 aaKnown RBP7.71□□□□□ -1.18
LINC00517-201ENST00000553396 I3L2K1 104 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 ZNF207O43670 478 aaKnown RBP7.7□□□□□ -1.18
LINC00517-201ENST00000553396 MT-CO2P00403 227 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 NHLRC4P0CG21 123 aaPredicted RBP7.7□□□□□ -1.18
LINC00517-201ENST00000553396 ADMP35318 185 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 SNCAP37840 140 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 AP3S2P59780 193 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 ZNF57Q68EA5 555 aaPredicted RBP7.7□□□□□ -1.18
LINC00517-201ENST00000553396 SPSB3Q6PJ21 355 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 TMED4Q7Z7H5 227 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 TMEM190Q8WZ59 177 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 GPR146Q96CH1 333 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 SCGB3A2Q96PL1 93 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 C20orf24Q9BUV8 137 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 ZNF436Q9C0F3 470 aaPredicted RBP7.7□□□□□ -1.18
LINC00517-201ENST00000553396 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 TECRQ9NZ01 308 aaKnown RBP7.7□□□□□ -1.18
LINC00517-201ENST00000553396 CACNG5Q9UF02 275 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
LINC00517-201ENST00000553396 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 NDUFA4O00483 81 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 SCAF4O95104 1147 aaKnown RBP7.69□□□□□ -1.18
LINC00517-201ENST00000553396 CTSGP08311 255 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 CD7P09564 240 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 RNASE2P10153 161 aaKnown RBP7.69□□□□□ -1.18
LINC00517-201ENST00000553396 MFAP4P55083 255 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 SUPT4H1P63272 117 aaKnown RBP7.69□□□□□ -1.18
LINC00517-201ENST00000553396 TMEM187Q14656 261 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 FAM219AQ8IW50 185 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 NEURL2Q9BR09 285 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 SRRQ9GZT4 340 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 WFDC10AQ9H1F0 79 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 TUBA4BQ9H853 241 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.69□□□□□ -1.18
LINC00517-201ENST00000553396 KCNIP3Q9Y2W7 256 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 TMEM56-RWDD3S4R434 201 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 STAB2Q8WWQ8 2551 aa7.69□□□□□ -1.18
LINC00517-201ENST00000553396 INS-IGF2F8WCM5 200 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 NUPL2O15504 423 aaKnown RBP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 GNG7O60262 68 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 YIF1AO95070 293 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 ANXA3P12429 323 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 INPP1P49441 399 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 SUB1P53999 127 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 ELLP55199 621 aaPredicted RBP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 SPCS3P61009 180 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 TRIQKQ629K1 86 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 MARC2Q969Z3 335 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 ATP6V0BQ99437 205 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 DAZ1Q9NQZ3 744 aaKnown RBP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 C19orf73Q9NVV2 129 aa7.68□□□□□ -1.18
LINC00517-201ENST00000553396 GAR1Q9NY12 217 aaKnown RBP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 MRPL27Q9P0M9 148 aaKnown RBP7.68□□□□□ -1.18
LINC00517-201ENST00000553396 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 LINC00854A0A1B0GVQ3 168 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 CEBPZOSA8MTT3 80 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 A8MZ25 164 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 CORTO00230 105 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 C8orf88P0DMB2 117 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 SULT1A3P0DMM9 295 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 SULT1A4P0DMN0 295 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 VAMP1P23763 118 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 OPRK1P41145 380 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 CCR6P51684 374 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 RELQ04864 619 aaPredicted RBP7.67□□□□□ -1.18
LINC00517-201ENST00000553396 BAK1Q16611 211 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 LINC01559Q495D7 138 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 AARDQ4LEZ3 155 aa7.67□□□□□ -1.18
LINC00517-201ENST00000553396 RBPMS2Q6ZRY4 209 aaKnown RBP7.67□□□□□ -1.18
LINC00517-201ENST00000553396 LYZL2Q7Z4W2 148 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms