RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 NUPL2O15504 423 aaKnown RBP11.63□□□□□ -0.55
SHMT2-204ENST00000553324 HOXA1P49639 335 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM187Q14656 261 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 Q56UQ5 140 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 ZNF57Q68EA5 555 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-204ENST00000553324 SRRQ9GZT4 340 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 ZC4H2Q9NQZ6 224 aa11.63□□□□□ -0.55
SHMT2-204ENST00000553324 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
SHMT2-204ENST00000553324 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 A8MZ25 164 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 I3L2K1 104 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 NDUFA4O00483 81 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 MT-CO2P00403 227 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-204ENST00000553324 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM128Q5BJH2 165 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 TRIQKQ629K1 86 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 Q6ZRM9 215 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 LGI3Q8N145 548 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 UBAC2Q8NBM4 344 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
SHMT2-204ENST00000553324 IGHV3-21A0A0B4J1V1 117 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM213A2RRL7 107 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 C8orf88P0DMB2 117 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 NPBWR1P48145 328 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 Q8N1Y9 231 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 UXS1Q8NBZ7 420 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 PINX1Q96BK5 328 aaKnown RBP11.61□□□□□ -0.55
SHMT2-204ENST00000553324 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
SHMT2-204ENST00000553324 CENPXA8MT69 81 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 K7EMT4 169 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 CTSGP08311 255 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 HTR2BP41595 481 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 CCR6P51684 374 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
SHMT2-204ENST00000553324 ANKRD55Q3KP44 614 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 TMED4Q7Z7H5 227 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
SHMT2-204ENST00000553324 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
SHMT2-204ENST00000553324 TRAV25A0A0B4J276 109 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 DUXBA0A1W2PPF3 345 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 IZUMO1RA6ND01 250 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 C15orf62A8K5M9 175 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 ZNF785A8K8V0 405 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 F8W735 103 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-204ENST00000553324 GNG7O60262 68 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 SCGB2A1O75556 95 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 IGHV4-30-4P0DP06 118 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 RBMS2Q15434 407 aaKnown RBP11.59□□□□□ -0.55
SHMT2-204ENST00000553324 CHRDL1Q9BU40 450 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
SHMT2-204ENST00000553324 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-204ENST00000553324 A0A1B0GU03 582 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 CEBPZOSA8MTT3 80 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
SHMT2-204ENST00000553324 ADMP35318 185 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 UBE2MP61081 183 aaKnown RBP11.58□□□□□ -0.56
SHMT2-204ENST00000553324 SMCO1Q147U7 214 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 BAK1Q16611 211 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 GUCA2BQ16661 112 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 BSXQ3C1V8 233 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 LAMTOR1Q6IAA8 161 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
SHMT2-204ENST00000553324 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 ASCL2Q99929 193 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 C7orf50Q9BRJ6 194 aaKnown RBP11.58□□□□□ -0.56
SHMT2-204ENST00000553324 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
SHMT2-204ENST00000553324 RPS10-NUDT3A0A1W2PQS6 291 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 YIF1AO95070 293 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 VAMP1P23763 118 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 ATP5IP56385 69 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-204ENST00000553324 CNPY1Q3B7I2 92 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 LINC00299Q6ZSB3 139 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 SLC16A13Q7RTY0 426 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 SBSPONQ8IVN8 264 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 LRTM2Q8N967 370 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
SHMT2-204ENST00000553324 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
SHMT2-204ENST00000553324 NEURL2Q9BR09 285 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms