RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TP53RKQ96S44 253 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 SPXQ9BT56 116 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 NXF2Q9GZY0 626 aaKnown RBP4.52□□□□□ -1.69
CCDC65-204ENST00000552188 NAA60Q9H7X0 242 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 PALMDQ9NP74 551 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 ZC4H2Q9NQZ6 224 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 NDUFA4L2Q9NRX3 87 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 F11RQ9Y624 299 aaKnown RBP4.52□□□□□ -1.69
CCDC65-204ENST00000552188 SMAD5-AS1Q9Y6J3 95 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
CCDC65-204ENST00000552188 IGHV3-21A0A0B4J1V1 117 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 PIGBOS1A0A0B4J2F0 54 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 A0A1B0GW64 132 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 MFSD2BA6NFX1 497 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 CGB1A6NKQ9 187 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 CENPXA8MT69 81 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 IGKV1-39P01597 117 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 HLA-AP01891 365 aaKnown RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 IGKV1D-39P04432 117 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 OR5AC1P0C628 307 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 UCP1P25874 307 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 MFAP4P55083 255 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 PRCDQ00LT1 54 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 WT1-ASQ06250 92 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 SPINK9Q5DT21 86 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 TMEM268Q5VZI3 342 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 LCN12Q6JVE5 192 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 TMED4Q7Z7H5 227 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 GTSCR1Q86UQ5 136 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 VN1R17PQ8TDU5 208 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 RBPMSQ93062 196 aaKnown RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 RNF125Q96EQ8 232 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 RTBDNQ9BSG5 229 aaPredicted RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 TMEM222Q9H0R3 208 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 TMEM14BQ9NUH8 114 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 GAR1Q9NY12 217 aaKnown RBP4.51□□□□□ -1.69
CCDC65-204ENST00000552188 C21orf62Q9NYP8 219 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 GPR132Q9UNW8 380 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 SORL1Q92673 2214 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
CCDC65-204ENST00000552188 LINC00854A0A1B0GVQ3 168 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 OR2T8A6NH00 312 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CRYM-AS1A6NIL9 109 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 DBX1A6NMT0 343 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CEBPZOSA8MTT3 80 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 LGALS9O00182 355 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CORTO00230 105 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 NUPL2O15504 423 aaKnown RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 ST8SIA3O43173 380 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 TGOLN2O43493 480 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 SCGB2A1O75556 95 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 IGKV1-5P01602 117 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 IGLV1-51P01701 117 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CSN3P07498 182 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 ETV6P41212 452 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 MLANAQ16655 118 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 GUCA2BQ16661 112 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 IZUMO4Q1ZYL8 232 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 RBPMS2Q6ZRY4 209 aaKnown RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CCDC190Q86UF4 302 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 GPHB5Q86YW7 130 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 FAM219AQ8IW50 185 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 SELENOHQ8IZQ5 122 aaKnown RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 LGI3Q8N145 548 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 OR2K2Q8NGT1 345 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 OR1P1Q8NH06 330 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 ZNF502Q8TBZ5 544 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 BSCL2Q96G97 398 aaPredicted RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 B9D2Q9BPU9 175 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 SOSTQ9BQB4 213 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 C20orf24Q9BUV8 137 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 RBM38Q9H0Z9 239 aaKnown RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 C5orf66Q9H5L9 145 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 TUBA4BQ9H853 241 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 HEYLQ9NQ87 328 aaPredicted RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 SLC2A8Q9NY64 477 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 CACFD1Q9UGQ2 172 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
CCDC65-204ENST00000552188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
CCDC65-204ENST00000552188 IGHV3-35A0A0C4DH35 117 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 NAP1L6A6NFF2 107 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 C2orf70A6NJV1 201 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 ZNF561-AS1K7EIQ3 104 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 GNG7O60262 68 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 YIF1AO95070 293 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 CDS2O95674 445 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 MT-CO2P00403 227 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 NHLRC4P0CG21 123 aaPredicted RBP4.49□□□□□ -1.69
CCDC65-204ENST00000552188 SULT1A3P0DMM9 295 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 SULT1A4P0DMN0 295 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 FOLR2P14207 255 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 CBLN1P23435 193 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 NPBWR1P48145 328 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 SPCS3P61009 180 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 SRPXP78539 464 aa4.49□□□□□ -1.69
CCDC65-204ENST00000552188 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms