RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 IER3IP1Q9Y5U9 82 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MICAL3Q7RTP6 2002 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 RALGAPA2Q2PPJ7 1873 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 MYH11P35749 1972 aa1.16□□□□□ -2.22
LIMA1-209ENST00000552008 SEC16AO15027 2179 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 DSPPQ9NZW4 1301 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 ZSWIM8A7E2V4 1837 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 SIP14410 1827 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 LTBP2Q14767 1821 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 NUP205Q92621 2012 aa1.15□□□□□ -2.22
LIMA1-209ENST00000552008 A0A087WUU8 490 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TRAV8-3A0A0A6YYJ7 113 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 IGHV3-21A0A0B4J1V1 117 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 A0A0B4J2C4 111 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TMEM269A0A1B0GVZ9 245 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 A0A1B0GX12 115 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TMEM212A6NML5 194 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FAM25AB3EWG3 89 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FAM25CB3EWG5 89 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FAM25GB3EWG6 89 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF878C9JN71 531 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 F5H5P2 479 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 H3BQ85 93 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 C15orf65H3BRN8 121 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 H3BSA7 217 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 J3QLW9 94 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CCRL2O00421 344 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PLPP3O14495 311 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SLC22A1O15245 554 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FABP7O15540 132 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SGCEO43556 437 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PSCAO43653 123 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FSTL3O95633 263 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CD8AP01732 235 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TRGV3P03979 118 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OPN1SWP03999 348 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 IFNA6P05013 189 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CST2P09228 141 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 COX5BP10606 129 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PIPP12273 146 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CCL2P13500 99 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 COX6B1P14854 86 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SPNP16150 400 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CBR1P16152 277 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF708P17019 499 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 AKR1C4P17516 323 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ATF1P18846 271 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 M6PRP20645 277 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CD40LGP29965 261 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 GRPRP30550 384 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 S100A7P31151 101 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PYCR1P32322 319 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SDC2P34741 201 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CA5AP35218 305 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TGFBR2P37173 567 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ETV6P41212 452 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 MAGEA2P43356 314 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OMPP47874 163 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 GABRA4P48169 554 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SRP9P49458 86 aaKnown RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 EVX1P49640 407 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TMBIM6P55061 237 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 VBP1P61758 197 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SNRPD2P62316 118 aaKnown RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 MRPS10P82664 201 aaKnown RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF117Q03924 483 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 SKP2Q13309 424 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 APOFQ13790 326 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 USF2Q15853 346 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PLPPR5Q32ZL2 321 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 CEACAM21Q3KPI0 293 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 HSD17B12Q53GQ0 312 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 PDZD11Q5EBL8 140 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TIMM23BQ5SRD1 257 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 C6orf52Q5T4I8 152 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OGFRL1Q5TC84 451 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 FAM27BQ5VT28 67 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 LPCAT3Q6P1A2 487 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF322Q6U7Q0 402 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 Q6ZT83 130 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 AHSA2Q719I0 299 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 S100A7AQ86SG5 101 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 LINC00337Q8N6G1 96 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TMEM251Q8N6I4 163 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF283Q8N7M2 679 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF565Q8N9K5 539 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 ZNF738Q8NE65 137 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OR2K2Q8NGT1 345 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OR4K13Q8NH42 304 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OR10D3Q8NH80 312 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 OR5AK2Q8NH90 309 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 RAB2BQ8WUD1 216 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 RNASE6Q93091 150 aaKnown RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 APOBEC3DQ96AK3 386 aaPredicted RBP1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TAMM41Q96BW9 452 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 BORCS8Q96FH0 119 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 TEX37Q96LM6 180 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 IGF2BP2-AS1Q96M15 143 aa1.15□□□□□ -2.23
LIMA1-209ENST00000552008 KCTD7Q96MP8 289 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms