RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 OR4X2Q8NGF9 303 aa10.46□□□□□ -0.73
ERBB3-215ENST00000550828 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
ERBB3-215ENST00000550828 ZNF747Q9BV97 191 aa10.46□□□□□ -0.73
ERBB3-215ENST00000550828 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
ERBB3-215ENST00000550828 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.73
ERBB3-215ENST00000550828 TCRBV4S1A1TA0A5B7 111 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 PRSS46E5RG02 174 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 F8W735 103 aaPredicted RBP10.45□□□□□ -0.74
ERBB3-215ENST00000550828 I3L2K1 104 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 DEDDO75618 318 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 MPC2O95563 127 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 IGHV3-48P01763 117 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 DEFA4P12838 97 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 HTR2BP41595 481 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 MLANAQ16655 118 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
ERBB3-215ENST00000550828 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 MISP3Q96FF7 219 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 CCDC140Q96MF4 163 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 HIPK2Q9H2X6 1198 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 PSENENQ9NZ42 101 aa10.45□□□□□ -0.74
ERBB3-215ENST00000550828 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 IGSF23A1L1A6 192 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 FAM223BA6NKX1 122 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 SMLR1H3BR10 107 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 IFNA10P01566 189 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 TRBV12-3P01733 135 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 IGHV3-11P01762 117 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 IGHV3-23P01764 117 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 SNCAP37840 140 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 BCAP31P51572 246 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 CYCSP99999 105 aaKnown RBP10.44□□□□□ -0.74
ERBB3-215ENST00000550828 ARL16Q0P5N6 197 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 SPANXN5Q5MJ07 72 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 FAM223AQ8IWN6 122 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 ZNF414Q96IQ9 312 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 ST6GAL2Q96JF0 529 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 CIB3Q96Q77 187 aaPredicted RBP10.44□□□□□ -0.74
ERBB3-215ENST00000550828 OR5B12Q96R08 314 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 MBD2Q9UBB5 411 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 U3KQ87 197 aa10.44□□□□□ -0.74
ERBB3-215ENST00000550828 VWFP04275 2813 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 FAM24AA6NFZ4 105 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 TSC22D2O75157 780 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 MT-CO2P00403 227 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 METTL15P1P0C7V9 234 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 LYL1P12980 280 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 HIST1H1BP16401 226 aaKnown RBP10.43□□□□□ -0.74
ERBB3-215ENST00000550828 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
ERBB3-215ENST00000550828 TAS2R30P59541 319 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 RAP2BP61225 183 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 CD300CQ08708 224 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 EXOSC2Q13868 293 aaKnown RBP10.43□□□□□ -0.74
ERBB3-215ENST00000550828 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 KHDC1LQ5JSQ8 128 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 TMEM65Q6PI78 240 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
ERBB3-215ENST00000550828 RANGRFQ9HD47 186 aaPredicted RBP10.43□□□□□ -0.74
ERBB3-215ENST00000550828 TSSC4Q9Y5U2 329 aaPredicted RBP10.43□□□□□ -0.74
ERBB3-215ENST00000550828 I3L521 148 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 ZNF343Q6P1L6 599 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 ETV3LQ6ZN32 361 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 C8orf86Q6ZUL3 223 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 NDUFA11Q86Y39 141 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 OR1L6Q8NGR2 347 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 RNASEH2CQ8TDP1 164 aaKnown RBP10.42□□□□□ -0.74
ERBB3-215ENST00000550828 SCARB1Q8WTV0 552 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 PINX1Q96BK5 328 aaKnown RBP10.42□□□□□ -0.74
ERBB3-215ENST00000550828 BSCL2Q96G97 398 aaPredicted RBP10.42□□□□□ -0.74
ERBB3-215ENST00000550828 USMG5Q96IX5 58 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 ZFP57Q9NU63 452 aa10.42□□□□□ -0.74
ERBB3-215ENST00000550828 STRAPQ9Y3F4 350 aaKnown RBP10.42□□□□□ -0.74
ERBB3-215ENST00000550828 L7N2F9 121 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 LGALS1P09382 135 aaKnown RBP10.41□□□□□ -0.74
ERBB3-215ENST00000550828 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.74
ERBB3-215ENST00000550828 VAMP2P63027 116 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 RUNX1Q01196 453 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 ATP5G2Q06055 141 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 TMEM252Q8N6L7 170 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 OR2T35Q8NGX2 323 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 VN1R17PQ8TDU5 208 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 C4orf3Q8WVX3 66 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 DUX3Q96PT4 197 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 LYRM2Q9NU23 88 aaPredicted RBP10.41□□□□□ -0.74
ERBB3-215ENST00000550828 PAIP2BQ9ULR5 123 aaKnown RBP10.41□□□□□ -0.74
ERBB3-215ENST00000550828 CMYA5Q8N3K9 4069 aa10.41□□□□□ -0.74
ERBB3-215ENST00000550828 IGHV4OR15-8A0A075B7B6 117 aa10.4□□□□□ -0.74
ERBB3-215ENST00000550828 A0A087WW49 117 aa10.4□□□□□ -0.74
ERBB3-215ENST00000550828 ANKRD34BA5PLL1 514 aa10.4□□□□□ -0.74
ERBB3-215ENST00000550828 E5RGE8 158 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms