RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CRATP43155 626 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 STX4Q12846 297 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 MED21Q13503 144 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 DCUN1D2Q6PH85 259 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 DHRS4L2Q6PKH6 230 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 FAM131AQ6UXB0 335 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 TESCQ96BS2 214 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 IMP4Q96G21 291 aaKnown RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 PPP3R2Q96LZ3 170 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 OR2A7Q96R45 310 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF251Q9BRH9 671 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 THTPAQ9BU02 230 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 MND1Q9BWT6 205 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 PRRG3Q9BZD7 231 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 DERL2Q9GZP9 239 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 NXF2Q9GZY0 626 aaKnown RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 METTL9Q9H1A3 318 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 FAM96AQ9H5X1 160 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 BIN3Q9NQY0 253 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 TMEM38BQ9NVV0 291 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 TAC3Q9UHF0 121 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 DKKL1Q9UK85 242 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 MCTS1Q9ULC4 181 aaKnown RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 UTP11Q9Y3A2 253 aaKnown RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 FLG2Q5D862 2391 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 STARD9Q9P2P6 4700 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 LOC285095A0A1B0GVY8 99 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF729A6NN14 1252 aaPredicted RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 IQCF5A8MTL0 148 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 M0QZK8 103 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 UPK2O00526 184 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 ITGB1BP1O14713 200 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 SGCEO43556 437 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 LYZL6O75951 148 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 KCNK2O95069 426 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 OR4A8P0C604 315 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 CCL2P13500 99 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 COL8A2P25067 703 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 NUDT2P50583 147 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 OR2B6P58173 313 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 AP3S2P59780 193 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 PDK2Q15119 407 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 TMED2Q15363 201 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 TAF1AQ15573 450 aaPredicted RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 SSX1Q16384 188 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 DEFB112Q30KQ8 113 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 RPL13AP3Q6NVV1 102 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF767PQ75MW2 155 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 PAGE2Q7Z2X7 111 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 CROCCP2Q86T23 111 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 NDUFA11Q86Y39 141 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 OR8A1Q8NGG7 326 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 OR4D6Q8NGJ1 314 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 OR5H6Q8NGV6 325 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 SKA2Q8WVK7 121 aaPredicted RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 MCEEQ96PE7 176 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 SERPINI1Q99574 410 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 MRPS26Q9BYN8 205 aaKnown RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 DYNLRB1Q9NP97 96 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 ASB4Q9Y574 426 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 SOX21Q9Y651 276 aaPredicted RBP2.49□□□□□ -2.01
LIMA1-205ENST00000550592 ARL5AQ9Y689 179 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
LIMA1-205ENST00000550592 MDFIC2A0A1B0GVS7 189 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 LRRN3E7EW58 273 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 KCNK1O00180 336 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CHP2O43745 196 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 SULT1C4O75897 302 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CXorf1O96002 111 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 IFNA6P05013 189 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 SMIM6P0DI80 62 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 OGNP20774 298 aaKnown RBP2.48□□□□□ -2.01
LIMA1-205ENST00000550592 MIPP30301 263 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 SLC6A1P30531 599 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 AGTR1P30556 359 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CCR7P32248 378 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 XKP51811 444 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 RAB38P57729 211 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 PSME3P61289 254 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 VSNL1P62760 191 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF846Q147U1 533 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CDK10Q15131 360 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
LIMA1-205ENST00000550592 PSG3Q16557 428 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CCSMST1Q4G0I0 132 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 HACD4Q5VWC8 232 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 Q6ZT83 130 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 CYP4Z1Q86W10 505 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 DHFR2Q86XF0 187 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 GID4Q8IVV7 300 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 C1orf174Q8IYL3 243 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 RPP25LQ8N5L8 163 aaKnown RBP2.48□□□□□ -2.01
LIMA1-205ENST00000550592 LINC00304Q8N9R0 145 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 DEFB108BQ8NET1 73 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 RAB8BQ92930 207 aa2.48□□□□□ -2.01
LIMA1-205ENST00000550592 PFDN5Q99471 154 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms