RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
HDAC7-227ENST00000548080 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 C11orf44Q8N8P7 122 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 DFFBO76075 338 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 CNIH1O95406 144 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 IFNA7P01567 189 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 NPY1RP25929 384 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 SNCAP37840 140 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 SSBP2P81877 361 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-227ENST00000548080 SLC38A11Q08AI6 406 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 ZNF767PQ75MW2 155 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 Q8N2B8 174 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 Q8N9W7 124 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 OR10P1Q8NGE3 313 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
HDAC7-227ENST00000548080 ATP5SQ99766 215 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
HDAC7-227ENST00000548080 WT1-ASQ06250 92 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
HDAC7-227ENST00000548080 ZNF266Q14584 549 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 FXYD3Q14802 87 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 ZNF562Q6V9R5 426 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 ETV3LQ6ZN32 361 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 BAP18Q8IXM2 172 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 LILRB2Q8N423 598 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 TMEM170AQ8WVE7 144 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 PINX1Q96BK5 328 aaKnown RBP13.68□□□□□ -0.22
HDAC7-227ENST00000548080 LINC00527Q9UJ94 153 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 PLXNB1O43157 2135 aa13.68□□□□□ -0.22
HDAC7-227ENST00000548080 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 LINC01548A6NM66 108 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 IFNA4P05014 189 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 RNASE2P10153 161 aaKnown RBP13.67□□□□□ -0.22
HDAC7-227ENST00000548080 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 HSD17B13Q7Z5P4 300 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-227ENST00000548080 SRSF8Q9BRL6 282 aaKnown RBP13.67□□□□□ -0.22
HDAC7-227ENST00000548080 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 TEX22C9J3V5 150 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 M0QZK8 103 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 FGF16O43320 207 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 SUB1P53999 127 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC7-227ENST00000548080 CX3CL1P78423 397 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 PHYHIPLQ96FC7 376 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 NOL4LQ96MY1 436 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-227ENST00000548080 UBQLN2Q9UHD9 624 aa13.67□□□□□ -0.22
HDAC7-227ENST00000548080 IFNA5P01569 189 aa13.66□□□□□ -0.22
HDAC7-227ENST00000548080 ALKAL2Q6UX46 152 aa13.66□□□□□ -0.22
HDAC7-227ENST00000548080 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
HDAC7-227ENST00000548080 TMEM147Q9BVK8 224 aa13.66□□□□□ -0.22
HDAC7-227ENST00000548080 ABHD5Q8WTS1 349 aa13.65□□□□□ -0.22
HDAC7-227ENST00000548080 SCARB1Q8WTV0 552 aa13.65□□□□□ -0.22
HDAC7-227ENST00000548080 ARPC1AQ92747 370 aa13.65□□□□□ -0.22
HDAC7-227ENST00000548080 GINS3Q9BRX5 216 aa13.65□□□□□ -0.22
HDAC7-227ENST00000548080 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 REG1AP05451 166 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 AREGP15514 252 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 DLK1P80370 383 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 EIF5AL1Q6IS14 154 aaKnown RBP13.64□□□□□ -0.23
HDAC7-227ENST00000548080 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 SLC35E3Q7Z769 313 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 P2RX4Q99571 388 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 CITED1Q99966 193 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 GGACTQ9BVM4 153 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
HDAC7-227ENST00000548080 APELAP0DMC3 54 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 VWC2Q2TAL6 325 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 SLC25A24Q6NUK1 477 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 ZNF114Q8NC26 417 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 PARD6GQ9BYG4 376 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-227ENST00000548080 WNT10AQ9GZT5 417 aa13.63□□□□□ -0.23
HDAC7-227ENST00000548080 FBXO24O75426 580 aa13.62□□□□□ -0.23
HDAC7-227ENST00000548080 CD28P10747 220 aa13.62□□□□□ -0.23
HDAC7-227ENST00000548080 NDPQ00604 133 aa13.62□□□□□ -0.23
HDAC7-227ENST00000548080 TMED6Q8WW62 240 aa13.62□□□□□ -0.23
HDAC7-227ENST00000548080 FAM103A1Q9BTL3 118 aaKnown RBP13.62□□□□□ -0.23
HDAC7-227ENST00000548080 IGHG2P01859 326 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 SEC11BP0C7V7 166 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 PVRIGQ6DKI7 326 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 CENPVQ7Z7K6 275 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-227ENST00000548080 ZNF329Q86UD4 541 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 OR1P1Q8NH06 330 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 RNASEH2CQ8TDP1 164 aaKnown RBP13.61□□□□□ -0.23
HDAC7-227ENST00000548080 WDR61Q9GZS3 305 aaKnown RBP13.61□□□□□ -0.23
HDAC7-227ENST00000548080 F11RQ9Y624 299 aaKnown RBP13.61□□□□□ -0.23
HDAC7-227ENST00000548080 UBE2L5PA0A1B0GUS4 154 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 FNDC10F2Z333 226 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 SPP1P10451 314 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms