RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TGOLN2O43493 480 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 NDUFB6O95139 128 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 GP9P14770 177 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 VAMP1P23763 118 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 NMSQ5H8A3 153 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 ADAMTSL5Q6ZMM2 481 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 CENPSQ8N2Z9 138 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 ATP6V0BQ99437 205 aa14.23□□□□□ -0.13
PRPF40B-206ENST00000547764 IGHV3-35A0A0C4DH35 117 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 ZNF320A2RRD8 509 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 C2orf70A6NJV1 201 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 CENPXA8MT69 81 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 MT-CO2P00403 227 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 SULT1A3P0DMM9 295 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 SULT1A4P0DMN0 295 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 RNASE2P10153 161 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 EDN2P20800 178 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 BTCP35070 178 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 PPP1R1AQ13522 171 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 DCTN2Q13561 401 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 ANKRD55Q3KP44 614 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 LINC00299Q6ZSB3 139 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 UBAC2Q8NBM4 344 aa14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 PINX1Q96BK5 328 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 C7orf50Q9BRJ6 194 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-206ENST00000547764 SFT2D2O95562 160 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 Q56UQ5 140 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 PVRIGQ6DKI7 326 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 SPSB3Q6PJ21 355 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 UNQ9165/PRO28630Q6UXU0 137 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 CHRDL1Q9BU40 450 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 FLVCR2Q9UPI3 526 aa14.21□□□□□ -0.13
PRPF40B-206ENST00000547764 PLA2G10O15496 165 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 NXPH3O95157 252 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 IGHV3-48P01763 117 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 FOLR2P14207 255 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 ADMP35318 185 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 SUB1P53999 127 aaKnown RBP eCLIP14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 SMCO1Q147U7 214 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 LRTM2Q8N967 370 aa14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 ZNF436Q9C0F3 470 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-206ENST00000547764 PIGBOS1A0A0B4J2F0 54 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 DUXBA0A1W2PPF3 345 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 TMEM213A2RRL7 107 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 CEBPZOSA8MTT3 80 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 A8MWP6 167 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 CTSGP08311 255 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 CBLN1P23435 193 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 FCGR2BP31994 310 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 MFAP4P55083 255 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 UBE2MP61081 183 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 BSXQ3C1V8 233 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 CACNG8Q8WXS5 425 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 TXN2Q99757 166 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 HEYLQ9NQ87 328 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 GAR1Q9NY12 217 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 CACFD1Q9UGQ2 172 aa14.19□□□□□ -0.14
PRPF40B-206ENST00000547764 DNAH9Q9NYC9 4486 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 A0A1B0GU03 582 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 IZUMO1RA6ND01 250 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 DEFB114Q30KQ6 69 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 CD300EQ496F6 205 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 TM4SF20Q53R12 229 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 LCN12Q6JVE5 192 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 DYNLRB2Q8TF09 96 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 CCDC32Q9BV29 185 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 PALMDQ9NP74 551 aa14.18□□□□□ -0.14
PRPF40B-206ENST00000547764 CORTO00230 105 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 LYRM1O43325 122 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 HTR2BP41595 481 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 C11orf87Q6NUJ2 197 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 OR2K2Q8NGT1 345 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 S100ZQ8WXG8 99 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 TMEM190Q8WZ59 177 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 B9D2Q9BPU9 175 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 PTTG2Q9NZH5 202 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 HSPB7Q9UBY9 170 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 UFC1Q9Y3C8 167 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 SMAD5-AS1Q9Y6J3 95 aa14.17□□□□□ -0.14
PRPF40B-206ENST00000547764 C9orf170A2RU37 121 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 NDUFA4O00483 81 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 NUPL2O15504 423 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 ANXA7P20073 488 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 ELLP55199 621 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 MLANAQ16655 118 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 UXS1Q8NBZ7 420 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 DUSP18Q8NEJ0 188 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 OR1S1Q8NH92 325 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 ZNF414Q96IQ9 312 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 HIPK2Q9H2X6 1198 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 FNDC4Q9H6D8 234 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 BATF3Q9NR55 127 aa14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 TECRQ9NZ01 308 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-206ENST00000547764 GNG7O60262 68 aa14.15□□□□□ -0.14
PRPF40B-206ENST00000547764 PITX3O75364 302 aa14.15□□□□□ -0.14
PRPF40B-206ENST00000547764 OR4E1P0C645 316 aa14.15□□□□□ -0.14
PRPF40B-206ENST00000547764 C8orf88P0DMB2 117 aa14.15□□□□□ -0.14
PRPF40B-206ENST00000547764 NPBWR1P48145 328 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms