RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 IL3RAP26951 378 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 PRIMA1Q86XR5 153 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 TGIF2LXQ8IUE1 241 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 PCGF1Q9BSM1 259 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 MLXQ9UH92 298 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 WASHC3Q9Y3C0 194 aa13.32□□□□□ -0.28
CHMP1A-204ENST00000547687 IGHV2-26A0A0B4J1V2 119 aa13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 RBP4P02753 201 aa13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 CDC34P49427 236 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 ARF6P62330 175 aa13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 ARSJQ5FYB0 599 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
CHMP1A-204ENST00000547687 SEC14L6B5MCN3 397 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 CRYBA1P05813 215 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 TAGLN2P37802 199 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 PSMB3P49720 205 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 FLI1Q01543 452 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 GCSAMLQ5JQS6 135 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 SLC35E3Q7Z769 313 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 OR4A5Q8NH83 315 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 C1orf159Q96HA4 380 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 GGTLC1Q9BX51 225 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 COMMD5Q9GZQ3 224 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 hCG_1809904A0A1W2PP81 198 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 A0A1W2PPE2 198 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 A0A1W2PR64 198 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 A0A1W2PRV1 198 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 PCP4L1A6NKN8 68 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 YIF1AO95070 293 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 MC5RP33032 325 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 RAB13P51153 203 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 PRRX1P54821 245 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 ATP5IP56385 69 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 LMO4P61968 165 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 TEPPQ6URK8 271 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 IL17RELQ6ZVW7 336 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 VSTM2AQ8TAG5 236 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 TMEM167AQ8TBQ9 72 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 TNFRSF14Q92956 283 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 ISOC2Q96AB3 205 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 PXMP4Q9Y6I8 212 aa13.3□□□□□ -0.28
CHMP1A-204ENST00000547687 A0A1W2PPV4 95 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 DEFA4P12838 97 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 MIC13Q5XKP0 118 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 CYB5R2Q6BCY4 276 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 OR1L8Q8NGR8 309 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 MANBALQ9NQG1 85 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 COL6A5A8TX70 2615 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 FNDC10F2Z333 226 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 CRLF1O75462 422 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 IGLV1-47P01700 117 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 MT-ND4LP03901 98 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 COX7A1P24310 79 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 CD81P60033 236 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 LCN2P80188 198 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 MEF2BQ02080 365 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 C2orf83Q53S99 150 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 CLEC7AQ9BXN2 247 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 SIRT7Q9NRC8 400 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 NDUFA4L2Q9NRX3 87 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
CHMP1A-204ENST00000547687 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 RAB31Q13636 194 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 HLA-DRB5Q30154 266 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 OR10W1Q8NGF6 305 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 GATAD1Q8WUU5 269 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 SSMEM1Q8WWF3 244 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 DNHD1Q96M86 4753 aa13.28□□□□□ -0.28
CHMP1A-204ENST00000547687 ENSAO43768 121 aaKnown RBP13.27□□□□□ -0.28
CHMP1A-204ENST00000547687 OR2C1O95371 312 aa13.27□□□□□ -0.28
CHMP1A-204ENST00000547687 BSXQ3C1V8 233 aa13.27□□□□□ -0.28
CHMP1A-204ENST00000547687 PNKDQ8N490 385 aa13.27□□□□□ -0.28
CHMP1A-204ENST00000547687 A0A087WWC5 75 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 M0R1W7 72 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 TGFAP01135 160 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 RNASE2P10153 161 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 FOLR2P14207 255 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 VMA21Q3ZAQ7 101 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 FAM24BQ8N5W8 94 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.29
CHMP1A-204ENST00000547687 A0A1W2PN81 502 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 ZNF727A8MUV8 499 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 PAGE4O60829 102 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 CHRNA7P36544 502 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 LGALS7P47929 136 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 RNF212Q495C1 297 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 BEND2Q8NDZ0 799 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 RITA1Q96K30 269 aa13.26□□□□□ -0.29
CHMP1A-204ENST00000547687 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 B4DEV8 164 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 E7EUB6 86 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 BUB1B-PAK6H3BSN5 160 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 RPL29P47914 159 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms