RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 RND2P52198 227 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-209ENST00000547018 ELOBQ15370 118 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 EFNB3Q15768 340 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 DPPA3Q6W0C5 159 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 BLNKQ8WV28 456 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 WASHC3Q9Y3C0 194 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 TMEM155Q4W5P6 130 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
SCAF11-209ENST00000547018 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
SCAF11-209ENST00000547018 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 IGHV3-35A0A0C4DH35 117 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
SCAF11-209ENST00000547018 SLC35B1P78383 322 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 MMDQ15546 238 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 GFI1BQ5VTD9 330 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 OR8B3Q8NGG8 313 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 FRZBQ92765 325 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 SLC35E1Q96K37 410 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 OR8B2Q96RD0 313 aa10.29□□□□□ -0.76
SCAF11-209ENST00000547018 FOXA2Q9Y261 457 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-209ENST00000547018 ANKRD17O75179 2603 aaKnown RBP10.28□□□□□ -0.76
SCAF11-209ENST00000547018 ZFHX3Q15911 3703 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 UNQ6494/PRO21346Q6UXR6 183 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 ST6GALNAC3Q8NDV1 305 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 C1orf159Q96HA4 380 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 CLDN34H7C241 214 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
SCAF11-209ENST00000547018 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
SCAF11-209ENST00000547018 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 Q8N7P7 452 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 NANPQ8TBE9 248 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 CORO2AQ92828 525 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 TIMD4Q96H15 378 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
SCAF11-209ENST00000547018 YTHDF2Q9Y5A9 579 aaKnown RBP10.28□□□□□ -0.76
SCAF11-209ENST00000547018 PYYP10082 97 aa10.27□□□□□ -0.76
SCAF11-209ENST00000547018 PAX5Q02548 391 aa10.27□□□□□ -0.76
SCAF11-209ENST00000547018 OR5I1Q13606 314 aa10.27□□□□□ -0.76
SCAF11-209ENST00000547018 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.76
SCAF11-209ENST00000547018 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.27□□□□□ -0.76
SCAF11-209ENST00000547018 OR5B12Q96R08 314 aa10.27□□□□□ -0.76
SCAF11-209ENST00000547018 LINC00869P0C866 280 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-209ENST00000547018 NAT8Q9UHE5 227 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 TIMM9Q9Y5J7 89 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 TIMM23O14925 209 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 RNASE2P10153 161 aaKnown RBP10.27□□□□□ -0.77
SCAF11-209ENST00000547018 MGST1P10620 155 aaKnown RBP10.27□□□□□ -0.77
SCAF11-209ENST00000547018 RHOBP62745 196 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-209ENST00000547018 OR1B1Q8NGR6 318 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-209ENST00000547018 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 CLEC7AQ9BXN2 247 aa10.27□□□□□ -0.77
SCAF11-209ENST00000547018 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 SH2D7A6NKC9 451 aaPredicted RBP10.26□□□□□ -0.77
SCAF11-209ENST00000547018 SLC17A3O00476 420 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 RNF224P0DH78 156 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 CRYBB3P26998 211 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 GALR1P47211 349 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 OR5AN1Q8NGI8 311 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 RAB1CQ92928 201 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 SERTAD4Q9NUC0 356 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 C19orf84I3L1E1 186 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 GCHFRP30047 84 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 PRRX1P54821 245 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 TCL1AP56279 114 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 SSTP61278 116 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 CYB5R2Q6BCY4 276 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 C11orf42Q8N5U0 333 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 SORL1Q92673 2214 aa10.26□□□□□ -0.77
SCAF11-209ENST00000547018 TRBV23-1A0A0A0MS06 115 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 RBP4P02753 201 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 IL3RAP26951 378 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 PRSS8Q16651 343 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 P2RX4Q99571 388 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 SLC25A33Q9BSK2 321 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 ACANP16112 2415 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 TRAV34A0A0B4J273 112 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 A0A1B0GW64 132 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 S100A9P06702 114 aaKnown RBP10.25□□□□□ -0.77
SCAF11-209ENST00000547018 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 OR52E5Q8NH55 327 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 SMDT1Q9H4I9 107 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 IGHV1-3A0A0C4DH29 117 aa10.25□□□□□ -0.77
SCAF11-209ENST00000547018 COX7A2P2O60397 106 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms