RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TEX50A0A1B0GTY4 177 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 NPIPB5A8MRT5 1133 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 B5MCH6 92 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 E7EUB6 86 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 H3BUA1 57 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 ADAP1O75689 374 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 DHFRP00374 187 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 IFNA17P01571 189 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 REG1AP05451 166 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 ELANEP08246 267 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 HOXB5P09067 269 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TRAPPC2P0DI81 140 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TRAPPC2BP0DI82 140 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 CD28P10747 220 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 PSMB8P28062 276 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 HOXA1P49639 335 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 WT1-ASQ06250 92 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 SRSF4Q08170 494 aaKnown RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TATDN3Q17R31 274 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 SPINK9Q5DT21 86 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 GGNBP1Q5YKI7 109 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TEX38Q6PEX7 206 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 C16orf54Q6UWD8 224 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 C19orf35Q6ZS72 473 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 HSD17B13Q7Z5P4 300 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 RNF152Q8N8N0 203 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 OR10W1Q8NGF6 305 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 MYOZ3Q8TDC0 251 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 GPR146Q96CH1 333 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 TMEM68Q96MH6 324 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 CITED2Q99967 270 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 GPN1Q9HCN4 374 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 NDUFA4L2Q9NRX3 87 aa4.93□□□□□ -1.62
PRKDC-211ENST00000546304 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.93□□□□□ -1.62
PRKDC-211ENST00000546304 A0A1B0GU03 582 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 C7orf66A4D0T2 115 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 MPTX1A8MV57 137 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 SNRPGP15A8MWD9 76 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 CCSO14618 274 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 NXPH3O95157 252 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 IFNA21P01568 189 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OR13C7P0DN81 318 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 SLC25A6P12236 298 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 CTRB1P17538 263 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 PSMB6P28072 239 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 TPPP2P59282 170 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 SPCS3P61009 180 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 HSPE1P61604 102 aaKnown RBP4.92□□□□□ -1.62
PRKDC-211ENST00000546304 RPL23AP62750 156 aaKnown RBP4.92□□□□□ -1.62
PRKDC-211ENST00000546304 DEFA5Q01523 94 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OXA1LQ15070 435 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 C2orf68Q2NKX9 166 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-211ENST00000546304 HIST2H2BDQ6DRA6 164 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 CTRB2Q6GPI1 263 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 TMEM65Q6PI78 240 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 NDUFA11Q86Y39 141 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 C12orf45Q8N5I9 185 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-211ENST00000546304 TTC9CQ8N5M4 171 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OR2C3Q8N628 320 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 UXS1Q8NBZ7 420 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF114Q8NC26 417 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OR5T1Q8NG75 326 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OR52E5Q8NH55 327 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 OR1S1Q8NH92 325 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 KLK15Q9H2R5 256 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 SLA2Q9H6Q3 261 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF355PQ9NSJ1 428 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 HSPB7Q9UBY9 170 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 CACFD1Q9UGQ2 172 aa4.92□□□□□ -1.62
PRKDC-211ENST00000546304 TSSC4Q9Y5U2 329 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-211ENST00000546304 IGLV11-55A0A075B6I3 123 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 FAM223BA6NKX1 122 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 FAM25EA8MYX2 175 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 FAM90A26D6RGX4 464 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 SSNA1O43805 119 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 PITX3O75364 302 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 BRI3O95415 125 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 PRH1P02810 166 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 TRGV3P03979 118 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 CRYGCP07315 174 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 DEFA4P12838 97 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 RHOGP84095 191 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 ODF1Q14990 250 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 IAH1Q2TAA2 248 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-211ENST00000546304 FAM223AQ8IWN6 122 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 KLHL30-AS1Q8NEE0 82 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 SPATA3Q8NHX4 192 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 C4orf3Q8WVX3 66 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 MS4A10Q96PG2 267 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 ENY2Q9NPA8 101 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
PRKDC-211ENST00000546304 ALG5Q9Y673 324 aa4.91□□□□□ -1.62
PRKDC-211ENST00000546304 TRBV9A0A0B4J1U6 114 aa4.9□□□□□ -1.63
PRKDC-211ENST00000546304 A0A0G2JLM5 398 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms