RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FGFBP3Q8TAT2 258 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 GNB1LQ9BYB4 327 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 HEPN1Q6WQI6 88 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 ABHD17AQ96GS6 310 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 MRPS16Q9Y3D3 137 aaKnown RBP10.43□□□□□ -0.74
COL4A6-209ENST00000545689 OR11H12B2RN74 326 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 OR11H1Q8NG94 326 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 NEUROG1Q92886 237 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 TRBV24-1A0A075B6N3 115 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 SRRM5B3KS81 715 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 OR9G9P0C7N8 305 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 ZNF56Q15929 161 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 LY6EQ16553 131 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 CRXO43186 299 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-209ENST00000545689 ATP5L2Q7Z4Y8 100 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 ORMDL3Q8N138 153 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 SMIM12Q96EX1 92 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 WFIKKN1Q96NZ8 548 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 EPDR1Q9UM22 224 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 ASCL2Q99929 193 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 ADIPOQQ15848 244 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 LOC107984156A0A0G2JMH3 177 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 ARL17AQ8IVW1 177 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 EFNB3Q15768 340 aa10.42□□□□□ -0.74
COL4A6-209ENST00000545689 OTX1P32242 354 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-209ENST00000545689 CTAG1AP78358 180 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 ASCL4Q6XD76 172 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 TDRD6O60522 2096 aaKnown RBP10.41□□□□□ -0.74
COL4A6-209ENST00000545689 REG4Q9BYZ8 158 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 NPFFO15130 113 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 CD59P13987 128 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 AGMATQ9BSE5 352 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 E9PQ18 207 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-209ENST00000545689 RNF5Q99942 180 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
COL4A6-209ENST00000545689 ADMP35318 185 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 E9PLN8 166 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 VKORC1Q9BQB6 163 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 RPUSD1Q9UJJ7 312 aaKnown RBP10.4□□□□□ -0.74
COL4A6-209ENST00000545689 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 SCN5AQ14524 2016 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 STAG3L3P0CL85 134 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 CCL3L1P16619 93 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 ATOH7Q8N100 152 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 A0A1B0GV90 55 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 C9JCJ5 164 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 PRSS8Q16651 343 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 RASL11AQ6T310 242 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
COL4A6-209ENST00000545689 CEACAM4O75871 244 aa10.4□□□□□ -0.75
COL4A6-209ENST00000545689 TMEM14EPQ6UXP3 125 aa10.4□□□□□ -0.75
COL4A6-209ENST00000545689 C1QTNF9P0C862 333 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 GPR183P32249 361 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 CACNG7P62955 275 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 TEX38Q6PEX7 206 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 CENPVQ7Z7K6 275 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 SERF1AO75920 110 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 TTC9CQ8N5M4 171 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 C8orf46Q8TAG6 207 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 FHL1Q13642 323 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 PPBPP02775 128 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 COLCA2A8K830 154 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 ETV2O00321 342 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 CD55P08174 381 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 FOXL1Q12952 345 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 NUP37Q8NFH4 326 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 FAM168AQ92567 244 aa10.39□□□□□ -0.75
COL4A6-209ENST00000545689 F11RQ9Y624 299 aaKnown RBP10.39□□□□□ -0.75
COL4A6-209ENST00000545689 TSC2P49815 1807 aa10.38□□□□□ -0.75
COL4A6-209ENST00000545689 GATA2P23769 480 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-209ENST00000545689 B3GALT5-AS1P59052 145 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms