RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	CHRDL1	Q9BU40	450 aa		10.07	□□□□□ -0.8
POLE-222	ENST00000545015	NAA60	Q9H7X0	242 aa		10.07	□□□□□ -0.8
POLE-222	ENST00000545015	DAZ1	Q9NQZ3	744 aa	Known RBP	10.07	□□□□□ -0.8
POLE-222	ENST00000545015	C14orf166	Q9Y224	244 aa	Known RBP	10.07	□□□□□ -0.8
POLE-222	ENST00000545015	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015		A0A0G2JRQ6	117 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015	FABP12	A6NFH5	140 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	CRYM-AS1	A6NIL9	109 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	C15orf62	A8K5M9	175 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	C3orf84	H3BNL1	204 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	ZNF701	M0R085	212 aa	Predicted RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015	ST8SIA3	O43173	380 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	CD7	P09564	240 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	OR5AC1	P0C628	307 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	MFAP4	P55083	255 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	IZUMO4	Q1ZYL8	232 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	OR52E5	Q8NH55	327 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	RBPMS	Q93062	196 aa	Known RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015	RRNAD1	Q96FB5	475 aa	Known RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015	GALNT14	Q96FL9	552 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	CITED4	Q96RK1	184 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	SPATA25	Q9BR10	227 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	RBM38	Q9H0Z9	239 aa	Known RBP	10.06	□□□□□ -0.8
POLE-222	ENST00000545015	TUBA4B	Q9H853	241 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	SCP2D1	Q9UJQ7	156 aa		10.06	□□□□□ -0.8
POLE-222	ENST00000545015	CORT	O00230	105 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	MT-CO2	P00403	227 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	REL	Q04864	619 aa	Predicted RBP	10.05	□□□□□ -0.8
POLE-222	ENST00000545015	GUCA2B	Q16661	112 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	BSX	Q3C1V8	233 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	ANKRD55	Q3KP44	614 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015		Q56UQ5	140 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	BTNL8	Q6UX41	500 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	SLC16A13	Q7RTY0	426 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	SLC35G3	Q8N808	338 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	OR51S1	Q8NGJ8	323 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	LHFPL5	Q8TAF8	219 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	DEDD2	Q8WXF8	326 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	IL22RA2	Q969J5	263 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	OR10C1	Q96KK4	312 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	SCGB3A2	Q96PL1	93 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	TMEM56-RWDD3	S4R434	201 aa		10.05	□□□□□ -0.8
POLE-222	ENST00000545015	IGHV3-21	A0A0B4J1V1	117 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	IGHV3-35	A0A0C4DH35	117 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	OR11H12	B2RN74	326 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	TSPAN4	O14817	238 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	NUPL2	O15504	423 aa	Known RBP	10.04	□□□□□ -0.8
POLE-222	ENST00000545015		Q6ZRM9	215 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	SELENOH	Q8IZQ5	122 aa	Known RBP	10.04	□□□□□ -0.8
POLE-222	ENST00000545015	TRIM63	Q969Q1	353 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	MISP3	Q96FF7	219 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	SPAG8	Q99932	426 aa	Predicted RBP	10.04	□□□□□ -0.8
POLE-222	ENST00000545015	PDCD10	Q9BUL8	212 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	CACFD1	Q9UGQ2	172 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015		V9GYH0	126 aa		10.04	□□□□□ -0.8
POLE-222	ENST00000545015	IFNA17	P01571	189 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	RNASE2	P10153	161 aa	Known RBP	10.03	□□□□□ -0.8
POLE-222	ENST00000545015	SNCA	P37840	140 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	SUB1	P53999	127 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
POLE-222	ENST00000545015	SPCS3	P61009	180 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	KLF9	Q13886	244 aa	Predicted RBP	10.03	□□□□□ -0.8
POLE-222	ENST00000545015	DEFB125	Q8N687	156 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	UBAC2	Q8NBM4	344 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	MUC7	Q8TAX7	377 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	TMEM230	Q96A57	120 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	FAM110A	Q9BQ89	295 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	EDA2R	Q9HAV5	297 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.03	□□□□□ -0.8
POLE-222	ENST00000545015	KCNIP3	Q9Y2W7	256 aa		10.03	□□□□□ -0.8
POLE-222	ENST00000545015	RBMY1B	A6NDE4	496 aa	Known RBP	10.02	□□□□□ -0.81
POLE-222	ENST00000545015	RBMY1E	A6NEQ0	496 aa	Known RBP	10.02	□□□□□ -0.81
POLE-222	ENST00000545015	RBMY1D	P0C7P1	496 aa	Known RBP	10.02	□□□□□ -0.81
POLE-222	ENST00000545015	FAU	P35544	74 aa	Known RBP	10.02	□□□□□ -0.81
POLE-222	ENST00000545015	ETV6	P41212	452 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	NPBWR1	P48145	328 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	AP3S2	P59780	193 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	TMEM187	Q14656	261 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	SPINK9	Q5DT21	86 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	LAMTOR1	Q6IAA8	161 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.02	□□□□□ -0.81
POLE-222	ENST00000545015	CCDC190	Q86UF4	302 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	DUSP18	Q8NEJ0	188 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	OR52B4	Q8NGK2	314 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	HIPK2	Q9H2X6	1198 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	SRD5A3	Q9H8P0	318 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	SMPX	Q9UHP9	88 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	DNAH7	Q8WXX0	4024 aa		10.02	□□□□□ -0.81
POLE-222	ENST00000545015	CCDC160	A6NGH7	325 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	GNG7	O60262	68 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	SCAF4	O95104	1147 aa	Known RBP	10.01	□□□□□ -0.81
POLE-222	ENST00000545015	HOXA1	P49639	335 aa	Predicted RBP	10.01	□□□□□ -0.81
POLE-222	ENST00000545015	SUPT4H1	P63272	117 aa	Known RBP	10.01	□□□□□ -0.81
POLE-222	ENST00000545015	ZNF79	Q15937	498 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	TMEM268	Q5VZI3	342 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	RNASE11	Q8TAA1	199 aa	Known RBP	10.01	□□□□□ -0.81
POLE-222	ENST00000545015	GPR146	Q96CH1	333 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	WFDC10A	Q9H1F0	79 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015	ENY2	Q9NPA8	101 aa		10.01	□□□□□ -0.81
POLE-222	ENST00000545015		A0A0B4J2A0	478 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms