RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 AKR1C4P17516 323 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 CBLN1P23435 193 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 UCP1P25874 307 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 GPR183P32249 361 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 TNFSF8P32971 234 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 NUP62P37198 522 aaPredicted RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 CD81P60033 236 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 UBE2MP61081 183 aaKnown RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF45Q02386 682 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 MRGPRG-AS1Q2M3A8 158 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF585BQ52M93 769 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 TMEM128Q5BJH2 165 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 S100A7AQ86SG5 101 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 LGI3Q8N145 548 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 UBAC2Q8NBM4 344 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF114Q8NC26 417 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 OR51S1Q8NGJ8 323 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 OR4C16Q8NGL9 310 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF502Q8TBZ5 544 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 RBMXL1Q96E39 390 aaKnown RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 MISP3Q96FF7 219 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 GALNT14Q96FL9 552 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 FANCD2OSQ96PS1 177 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 GPHA2Q96T91 129 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 SPAG8Q99932 426 aaPredicted RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 SPATA25Q9BR10 227 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 SLIRPQ9GZT3 109 aaKnown RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 HEYLQ9NQ87 328 aaPredicted RBP4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 U3KQ87 197 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 LYSTQ99698 3801 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 TRAV14DV4A0A0A6YYC5 116 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 TRAV3A0A0B4J244 114 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 CRYM-AS1A6NIL9 109 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 PPP5D1E7EU14 171 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 IFNA21P01568 189 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 SULT1A3P0DMM9 295 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 SULT1A4P0DMN0 295 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 PI3P19957 117 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 FCGR2BP31994 310 aaPredicted RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 OPRK1P41145 380 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 CCR6P51684 374 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 AP2S1P53680 142 aaPredicted RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 RAB11AP62491 216 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 WT1-ASQ06250 92 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 RBMS2Q15434 407 aaKnown RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 DEFB114Q30KQ6 69 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 CD300EQ496F6 205 aaPredicted RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 UXS1Q8NBZ7 420 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 OR10W1Q8NGF6 305 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 OR52B4Q8NGK2 314 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 RNASEH2CQ8TDP1 164 aaKnown RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 PINX1Q96BK5 328 aaKnown RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 CIB3Q96Q77 187 aaPredicted RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 TP53RKQ96S44 253 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 NEURL2Q9BR09 285 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 C7orf50Q9BRJ6 194 aaKnown RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 C20orf24Q9BUV8 137 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 ZNF436Q9C0F3 470 aaPredicted RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 NXF2Q9GZY0 626 aaKnown RBP4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 C5orf66Q9H5L9 145 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 GPR132Q9UNW8 380 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 NSG2Q9Y328 171 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM56-RWDD3S4R434 201 aa4.27□□□□□ -1.73
CLSTN3-215ENST00000544584 A0A1B0GU03 582 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 MFSD2BA6NFX1 497 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 OR11H12B2RN74 326 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 E7EUB6 86 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 DNASE2O00115 360 aaPredicted RBP4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 ST8SIA3O43173 380 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 MT-CO2P00403 227 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 IFNA10P01566 189 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TRBV12-3P01733 135 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 IGHV3-23P01764 117 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 OR5AC1P0C628 307 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 SLC25A6P12236 298 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 NPPCP23582 126 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 ETV6P41212 452 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 APOC4P55056 127 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 SMCO1Q147U7 214 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM268Q5VZI3 342 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM116Q8NCL8 245 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 OR4D10Q8NGI6 311 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 OR1S1Q8NH92 325 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 COQ8AQ8NI60 647 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM190Q8WZ59 177 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 TMEM230Q96A57 120 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 CCDC140Q96MF4 163 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 METTL26Q96S19 204 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 FAM110AQ9BQ89 295 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 MIXL1Q9H2W2 232 aa4.26□□□□□ -1.73
CLSTN3-215ENST00000544584 ZC4H2Q9NQZ6 224 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms