RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PRSS2P07478 247 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 AREGP15514 252 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 IGFBP3P17936 291 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 DUTP33316 252 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 HOXA1P49639 335 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 PPP5CP53041 499 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 DAD1P61803 113 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 USF2Q15853 346 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 KCTD21Q4G0X4 260 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 UBE2UQ5VVX9 321 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 TTC23Q5W5X9 447 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 FAM122CQ6P4D5 195 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 RPL22L1Q6P5R6 122 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 C19orf35Q6ZS72 473 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 TCF24Q7RTU0 167 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 C6orf201Q7Z4U5 140 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 HSD17B13Q7Z5P4 300 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 AQP12AQ8IXF9 295 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 OR4A4PQ8NGN8 299 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 OR10J5Q8NHC4 309 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM167AQ8TBQ9 72 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 CANT1Q8WVQ1 401 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 TRUB1Q8WWH5 349 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 DGCR14Q96DF8 476 aaKnown RBP2.85□□□□□ -1.95
SNHG1-220ENST00000544550 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 FAAP24Q9BTP7 215 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 Q9H3A6 140 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 Q9H8V8 135 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 C12orf4Q9NQ89 552 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 PLEKHJ1Q9NW61 149 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 CLEC5AQ9NY25 188 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 RFNGQ9Y644 331 aa2.85□□□□□ -1.95
SNHG1-220ENST00000544550 IGHV3OR16-8A0A075B7F1 116 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 A0A1W2PS18 150 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 FCGR3BO75015 233 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 SLC22A5O76082 557 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 YIF1AO95070 293 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 HRASP01112 189 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 CD36P16671 472 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 CELP19835 753 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 CRHBPP24387 322 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 EMP1P54849 157 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 RPL8P62917 257 aaKnown RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 CLINT1Q14677 625 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 Q499Y3 187 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 Q56UQ5 140 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 YIF1BQ5BJH7 314 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 ACTL10Q5JWF8 245 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 OGFRL1Q5TC84 451 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 OR2G6Q5TZ20 316 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 FAM222AQ5U5X8 452 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 KDM4DQ6B0I6 523 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF705AQ6ZN79 300 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 Q75L30 129 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 KCTD9Q7L273 389 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 LHFPL3Q86UP9 236 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 PUSL1Q8N0Z8 303 aaKnown RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 GDPD1Q8N9F7 314 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 UBAC2Q8NBM4 344 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 OR6M1Q8NGM8 313 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 OR4S2Q8NH73 311 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 TMED6Q8WW62 240 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF414Q96IQ9 312 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM70Q9BUB7 260 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM59Q9BXS4 323 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 Q9N2K0 584 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 RABAC1Q9UI14 185 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 EXOGQ9Y2C4 368 aaKnown RBP2.84□□□□□ -1.95
SNHG1-220ENST00000544550 LINC00588Q9Y4M8 146 aa2.84□□□□□ -1.95
SNHG1-220ENST00000544550 TRBV6-7A0A0A0MS04 114 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3-49A0A0A0MS15 119 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 KNCNA6PVL3 124 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 E7EUB6 86 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 E9PI62 339 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 G3V2T6 193 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 K7EQG2 157 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 BET1O15155 118 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 FABP7O15540 132 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 FKBP6O75344 327 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF705BP0CI00 300 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 FCGR1AP12314 374 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 HLA-GP17693 338 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 EIF2B2P49770 351 aaKnown RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 TAS2R43P59537 309 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 OR2B8PP59922 312 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 DLK1P80370 383 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 MRPS15P82914 257 aaKnown RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 MS4A2Q01362 244 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GAGE2BQ13066 116 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 RCN1Q15293 331 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GAGE2EQ4V326 116 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GAGE2AQ6NT46 116 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 SLC25A24Q6NUK1 477 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms