RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CACNG8Q8WXS5 425 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 WDR89Q96FK6 387 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-208ENST00000544432 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 DNAH7Q8WXX0 4024 aa10.47□□□□□ -0.73
VAMP1-208ENST00000544432 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 IGHV3-21A0A0B4J1V1 117 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 MT-CO2P00403 227 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 IFNA17P01571 189 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 OR5AC1P0C628 307 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.73
VAMP1-208ENST00000544432 GUCA2BQ16661 112 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 HAGHQ16775 308 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 Q56UQ5 140 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 SLC35G3Q8N808 338 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 OR52E5Q8NH55 327 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 RBPMSQ93062 196 aaKnown RBP10.46□□□□□ -0.73
VAMP1-208ENST00000544432 MISP3Q96FF7 219 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 PDCD10Q9BUL8 212 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 RBM38Q9H0Z9 239 aaKnown RBP10.46□□□□□ -0.73
VAMP1-208ENST00000544432 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
VAMP1-208ENST00000544432 TMEM56-RWDD3S4R434 201 aa10.46□□□□□ -0.73
VAMP1-208ENST00000544432 A0A0G2JRQ6 117 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 C15orf62A8K5M9 175 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 NUPL2O15504 423 aaKnown RBP10.45□□□□□ -0.74
VAMP1-208ENST00000544432 CD7P09564 240 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SNCAP37840 140 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SUB1P53999 127 aaKnown RBP eCLIP10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SPCS3P61009 180 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 Q6ZRM9 215 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SLC16A13Q7RTY0 426 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
VAMP1-208ENST00000544432 DEDD2Q8WXF8 326 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 IL22RA2Q969J5 263 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 GALNT14Q96FL9 552 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 SPATA25Q9BR10 227 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
VAMP1-208ENST00000544432 CACFD1Q9UGQ2 172 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 KCNIP3Q9Y2W7 256 aa10.45□□□□□ -0.74
VAMP1-208ENST00000544432 CCDC160A6NGH7 325 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 C3orf84H3BNL1 204 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 CORTO00230 105 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 ETV6P41212 452 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 RBPMS2Q6ZRY4 209 aaKnown RBP10.44□□□□□ -0.74
VAMP1-208ENST00000544432 UBAC2Q8NBM4 344 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 RNASE11Q8TAA1 199 aaKnown RBP10.44□□□□□ -0.74
VAMP1-208ENST00000544432 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 ZNF414Q96IQ9 312 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 ENY2Q9NPA8 101 aa10.44□□□□□ -0.74
VAMP1-208ENST00000544432 TSPAN4O14817 238 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 RNASE2P10153 161 aaKnown RBP10.43□□□□□ -0.74
VAMP1-208ENST00000544432 S100A5P33763 92 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 FAUP35544 74 aaKnown RBP10.43□□□□□ -0.74
VAMP1-208ENST00000544432 NPBWR1P48145 328 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 AP3S2P59780 193 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 KLF9Q13886 244 aaPredicted RBP10.43□□□□□ -0.74
VAMP1-208ENST00000544432 TMEM187Q14656 261 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 BSXQ3C1V8 233 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 PYDC2Q56P42 97 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 SPINK9Q5DT21 86 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 DUSP18Q8NEJ0 188 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 TRIM63Q969Q1 353 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 OR10C1Q96KK4 312 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 CITED4Q96RK1 184 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
VAMP1-208ENST00000544432 MCUBQ9NWR8 336 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 V9GYH0 126 aa10.43□□□□□ -0.74
VAMP1-208ENST00000544432 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
VAMP1-208ENST00000544432 RBMY1BA6NDE4 496 aaKnown RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 RBMY1EA6NEQ0 496 aaKnown RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 GNG7O60262 68 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 SCAF4O95104 1147 aaKnown RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 RBMY1DP0C7P1 496 aaKnown RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 HOXA1P49639 335 aaPredicted RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 TMEM268Q5VZI3 342 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 LAMTOR1Q6IAA8 161 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 CCDC190Q86UF4 302 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 PINX1Q96BK5 328 aaKnown RBP10.42□□□□□ -0.74
VAMP1-208ENST00000544432 C20orf24Q9BUV8 137 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 SMPXQ9UHP9 88 aa10.42□□□□□ -0.74
VAMP1-208ENST00000544432 PIGBOS1A0A0B4J2F0 54 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 HTR2BP41595 481 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 ZNF79Q15937 498 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 TOMM5Q8N4H5 51 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 MUC7Q8TAX7 377 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 SRD5A3Q9H8P0 318 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 CACNG5Q9UF02 275 aa10.41□□□□□ -0.74
VAMP1-208ENST00000544432 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 IGHV7-4-1A0A0J9YVY3 117 aa10.4□□□□□ -0.74
VAMP1-208ENST00000544432 TMEM50AO95807 157 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms