RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 SRSF1Q07955 248 aaKnown RBP eCLIP12.82□□□□□ -0.36
SPDEF-202ENST00000544425 MMDQ15546 238 aa12.82□□□□□ -0.36
SPDEF-202ENST00000544425 SSX2Q16385 188 aa12.82□□□□□ -0.36
SPDEF-202ENST00000544425 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
SPDEF-202ENST00000544425 FCN1O00602 326 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPDEF-202ENST00000544425 STAG3L2P0CL84 134 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 STAG3L3P0CL85 134 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 ATP5J2P56134 94 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
SPDEF-202ENST00000544425 ETFRF1Q6IPR1 90 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 CLEC2AQ6UVW9 174 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 OR1P1Q8NH06 330 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 C19orf24Q9BVV8 132 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 FNDC4Q9H6D8 234 aaPredicted RBP12.81□□□□□ -0.36
SPDEF-202ENST00000544425 LPAR2Q9HBW0 351 aa12.81□□□□□ -0.36
SPDEF-202ENST00000544425 A0A1W2PRD5 423 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 A0A1W2PRF3 423 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 A0A1W2PRM7 423 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 CORTO00230 105 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 CRYGCP07315 174 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 FBP1P09467 338 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 PLGLAQ15195 96 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 DYNAPQ8N1N2 210 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 OR2T6Q8NHC8 308 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 SRSF12Q8WXF0 261 aaKnown RBP12.8□□□□□ -0.36
SPDEF-202ENST00000544425 OR10J1P30954 320 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 RHOBP62745 196 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
SPDEF-202ENST00000544425 PAX8Q06710 450 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 Q8N6K4 173 aa12.8□□□□□ -0.36
SPDEF-202ENST00000544425 IGHV4-61A0A0C4DH41 118 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 CXorf1O96002 111 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 DEFA4P12838 97 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 AREGP15514 252 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 DSCR9P59020 149 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 GNB1P62873 340 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 FLI1Q01543 452 aaPredicted RBP12.79□□□□□ -0.36
SPDEF-202ENST00000544425 RHEBQ15382 184 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 F11RQ9Y624 299 aaKnown RBP12.79□□□□□ -0.36
SPDEF-202ENST00000544425 DOPEY1Q5JWR5 2465 aa12.79□□□□□ -0.36
SPDEF-202ENST00000544425 H3BQ15 152 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 REG1AP05451 166 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 COX6B1P14854 86 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 CD81P60033 236 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 HES1Q14469 280 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 C5orf64Q2M2E5 130 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 AWAT1Q58HT5 328 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 NANPQ8TBE9 248 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 AJUBAQ96IF1 538 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 C7orf77A4D0Y5 90 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 TMEM250H0YL14 139 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 M0R036 132 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 MFAP2P55001 183 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 CYP2G1PQ6ZSU1 146 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 ACY3Q96HD9 319 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
SPDEF-202ENST00000544425 SMCO4Q9NRQ5 59 aa12.78□□□□□ -0.36
SPDEF-202ENST00000544425 PUS1Q9Y606 427 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPDEF-202ENST00000544425 CNIH1O95406 144 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 MT-CO2P00403 227 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 CD24P25063 80 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 ZNF562Q6V9R5 426 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 SPNS3Q6ZMD2 512 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 TUBA4BQ9H853 241 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 RPS10P5Q9NQ39 176 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 TNCP24821 2201 aa12.77□□□□□ -0.37
SPDEF-202ENST00000544425 FAM106CPP0CH98 169 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 PAX6P26367 422 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 CEBPGP53567 150 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 SELENOTP62341 195 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 TCRBV4S1A1TA0A5B7 111 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 PAGE4O60829 102 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 BRS3P32247 399 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 FXYD3Q14802 87 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 RNF2Q99496 336 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
SPDEF-202ENST00000544425 CENPVL3A0A0U1RRI6 287 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 NPFFO15130 113 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 OR5G3P0C626 314 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 SAA4P35542 130 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 PNRC1Q12796 327 aaPredicted RBP12.75□□□□□ -0.37
SPDEF-202ENST00000544425 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
SPDEF-202ENST00000544425 C1RLQ9NZP8 487 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms