RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 RNF141Q8WVD5 230 aa24.04■■□□□ 1.44
CCM2-219ENST00000544363 CACNG8Q8WXS5 425 aa24.04■■□□□ 1.44
CCM2-219ENST00000544363 RSG1Q9BU20 258 aa24.04■■□□□ 1.44
CCM2-219ENST00000544363 CRYGCP07315 174 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 NMBP08949 121 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 SULT1A2P50226 295 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 TREML4Q6UXN2 200 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 IL17RELQ6ZVW7 336 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 WNT10AQ9GZT5 417 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 ZFHX3Q15911 3703 aa24.03■■□□□ 1.44
CCM2-219ENST00000544363 NPIPB5A8MRT5 1133 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 MLANAQ16655 118 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 BTNL8Q6UX41 500 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 SGMS2Q8NHU3 365 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 LRRC20Q8TCA0 184 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 PSMG3Q9BT73 122 aaPredicted RBP24.02■■□□□ 1.44
CCM2-219ENST00000544363 PARP11Q9NR21 331 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 CORTO00230 105 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 TTC9CQ8N5M4 171 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 LFNGQ8NES3 379 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 TIMM9Q9Y5J7 89 aa24.02■■□□□ 1.44
CCM2-219ENST00000544363 MYO9AB2RTY4 2548 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 OPRK1P41145 380 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 SLC16A13Q7RTY0 426 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 OR1L6Q8NGR2 347 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 MISP3Q96FF7 219 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 FNDC4Q9H6D8 234 aaPredicted RBP24.01■■□□□ 1.43
CCM2-219ENST00000544363 DMRT1Q9Y5R6 373 aa24.01■■□□□ 1.43
CCM2-219ENST00000544363 BTBD17A6NE02 478 aa24■■□□□ 1.43
CCM2-219ENST00000544363 ATP6V0E1O15342 81 aa24■■□□□ 1.43
CCM2-219ENST00000544363 MPDU1O75352 247 aa24■■□□□ 1.43
CCM2-219ENST00000544363 DEFA4P12838 97 aa24■■□□□ 1.43
CCM2-219ENST00000544363 AKR1C1Q04828 323 aa24■■□□□ 1.43
CCM2-219ENST00000544363 GAMTQ14353 236 aa24■■□□□ 1.43
CCM2-219ENST00000544363 TMEM182Q6ZP80 229 aaPredicted RBP24■■□□□ 1.43
CCM2-219ENST00000544363 CENPVQ7Z7K6 275 aaPredicted RBP24■■□□□ 1.43
CCM2-219ENST00000544363 SRP14P37108 136 aaKnown RBP23.99■■□□□ 1.43
CCM2-219ENST00000544363 NPCDR1Q9BY65 106 aa23.99■■□□□ 1.43
CCM2-219ENST00000544363 LSM4Q9Y4Z0 139 aaKnown RBP23.99■■□□□ 1.43
CCM2-219ENST00000544363 LINC01548A6NM66 108 aa23.99■■□□□ 1.43
CCM2-219ENST00000544363 NDUFA5Q16718 116 aa23.99■■□□□ 1.43
CCM2-219ENST00000544363 SLC35E1Q96K37 410 aa23.99■■□□□ 1.43
CCM2-219ENST00000544363 NOTCH2Q04721 2471 aa23.99■■□□□ 1.43
CCM2-219ENST00000544363 RAB5CP51148 216 aa23.98■■□□□ 1.43
CCM2-219ENST00000544363 ETFRF1Q6IPR1 90 aa23.98■■□□□ 1.43
CCM2-219ENST00000544363 TEPPQ6URK8 271 aa23.98■■□□□ 1.43
CCM2-219ENST00000544363 TMEM144Q7Z5S9 345 aa23.98■■□□□ 1.43
CCM2-219ENST00000544363 ZNF709Q8N972 641 aa23.98■■□□□ 1.43
CCM2-219ENST00000544363 UMAD1C9J7I0 102 aa23.97■■□□□ 1.43
CCM2-219ENST00000544363 SERF2P84101 59 aa23.97■■□□□ 1.43
CCM2-219ENST00000544363 OR2T6Q8NHC8 308 aa23.97■■□□□ 1.43
CCM2-219ENST00000544363 TMEM68Q96MH6 324 aa23.97■■□□□ 1.43
CCM2-219ENST00000544363 VPREB3Q9UKI3 123 aa23.97■■□□□ 1.43
CCM2-219ENST00000544363 ZNF705EA8MWA4 302 aaPredicted RBP23.96■■□□□ 1.43
CCM2-219ENST00000544363 C17orf112F2Z3M2 114 aa23.96■■□□□ 1.43
CCM2-219ENST00000544363 C9orf152Q5JTZ5 239 aa23.96■■□□□ 1.43
CCM2-219ENST00000544363 UNQ5815/PRO19632Q6UWF5 114 aa23.96■■□□□ 1.43
CCM2-219ENST00000544363 MGST2Q99735 147 aa23.96■■□□□ 1.43
CCM2-219ENST00000544363 TSPAN9O75954 239 aa23.95■■□□□ 1.43
CCM2-219ENST00000544363 HNF1AP20823 631 aa23.95■■□□□ 1.43
CCM2-219ENST00000544363 SAT2Q96F10 170 aaPredicted RBP23.95■■□□□ 1.43
CCM2-219ENST00000544363 TMUB1Q9BVT8 246 aa23.95■■□□□ 1.43
CCM2-219ENST00000544363 TRIM77I1YAP6 450 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 HOXA3O43365 443 aaPredicted RBP23.95■■□□□ 1.42
CCM2-219ENST00000544363 IGHG2P01859 326 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 ECSCRQ19T08 205 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 AKIRIN2Q53H80 203 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 AKR1C8PQ5T2L2 129 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 OR5T1Q8NG75 326 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 FAM110DQ8TAY7 271 aaPredicted RBP23.95■■□□□ 1.42
CCM2-219ENST00000544363 TNFRSF19Q9NS68 423 aa23.95■■□□□ 1.42
CCM2-219ENST00000544363 TLN2Q9Y4G6 2542 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 MT-CO2P00403 227 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 PRH1P02810 166 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 CRIP2P52943 208 aaPredicted RBP23.94■■□□□ 1.42
CCM2-219ENST00000544363 BLCAPP62952 87 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 SIGLECL1Q8N7X8 197 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 ACY3Q96HD9 319 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 TMEM160Q9NX00 188 aa23.94■■□□□ 1.42
CCM2-219ENST00000544363 ACANP16112 2415 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 I3L2K1 104 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 CYB5BO43169 146 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 CAMLGP49069 296 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 RAB31Q13636 194 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 CXorf58Q96LI9 332 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 FANCD2OSQ96PS1 177 aa23.93■■□□□ 1.42
CCM2-219ENST00000544363 IGLV11-55A0A075B6I3 123 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 LINC00862A6NCI5 91 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 IGHV3-48P01763 117 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 SLC35E3Q7Z769 313 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 GGTLC1Q9BX51 225 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 IGKV1OR2-108A0A075B7D4 117 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 AGPAT2O15120 278 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 BLOC1S1P78537 153 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 SLC7A5P1Q8MH63 180 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 NPIPB3Q92617 1050 aa23.92■■□□□ 1.42
CCM2-219ENST00000544363 MRPL36Q9P0J6 103 aaKnown RBP23.92■■□□□ 1.42
CCM2-219ENST00000544363 G3V318 75 aa23.91■■□□□ 1.42
CCM2-219ENST00000544363 FHITP49789 147 aa23.91■■□□□ 1.42
CCM2-219ENST00000544363 SMR3AQ99954 134 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms