RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PVRIGQ6DKI7 326 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 CLEC19AQ6UXS0 136 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 LYG2Q86SG7 212 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 BSCL2Q96G97 398 aaPredicted RBP13.7□□□□□ -0.22
TSFM-208ENST00000543727 OR4C12Q96R67 309 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 TXN2Q99757 166 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 SIGLEC8Q9NYZ4 499 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 PRR13Q9NZ81 148 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 HSPB7Q9UBY9 170 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 K7EIM0 57 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 SAP30O75446 220 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 TCRBP04435 133 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 SYNJ2BPP57105 145 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 SCARB1Q8WTV0 552 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
TSFM-208ENST00000543727 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 PPP5D1E7EU14 171 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 CLEC3BP05452 202 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 ATP5IP56385 69 aaPredicted RBP13.68□□□□□ -0.22
TSFM-208ENST00000543727 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
TSFM-208ENST00000543727 FAM106AQ4KMX7 169 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 MISP3Q96FF7 219 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 FLVCR2Q9UPI3 526 aa13.68□□□□□ -0.22
TSFM-208ENST00000543727 CEBPZOSA8MTT3 80 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 I3L2K1 104 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 TGOLN2O43493 480 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 PITX3O75364 302 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 LY86O95711 162 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 RNASE2P10153 161 aaKnown RBP13.67□□□□□ -0.22
TSFM-208ENST00000543727 GPR183P32249 361 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 OR1S1Q8NH92 325 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 HEYLQ9NQ87 328 aaPredicted RBP13.67□□□□□ -0.22
TSFM-208ENST00000543727 NUDT15Q9NV35 164 aa13.67□□□□□ -0.22
TSFM-208ENST00000543727 A8MWP6 167 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 MED6O75586 246 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 IFNA21P01568 189 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 IGHV3-23P01764 117 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 ANXA7P20073 488 aaKnown RBP13.66□□□□□ -0.22
TSFM-208ENST00000543727 MFAP4P55083 255 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 C2orf83Q53S99 150 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 SLC24A4Q8NFF2 622 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
TSFM-208ENST00000543727 MITD1Q8WV92 249 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 PALMDQ9NP74 551 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 AURKAIP1Q9NWT8 199 aaPredicted RBP13.66□□□□□ -0.22
TSFM-208ENST00000543727 U3KQ87 197 aa13.66□□□□□ -0.22
TSFM-208ENST00000543727 RPS10-NUDT3A0A1W2PQS6 291 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 SCGB2A1O75556 95 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 MT-CO2P00403 227 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 DEFA1P59665 94 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 DEFA3P59666 94 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 KRTAP10-11P60412 298 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 ENKURQ8TC29 256 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 ZNF436Q9C0F3 470 aaPredicted RBP13.65□□□□□ -0.22
TSFM-208ENST00000543727 S4R3C0 116 aa13.65□□□□□ -0.22
TSFM-208ENST00000543727 OR2T8A6NH00 312 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
TSFM-208ENST00000543727 OR2C1O95371 312 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 H2AFB2P0C5Z0 115 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 NPBWR1P48145 328 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 ELLP55199 621 aaPredicted RBP13.64□□□□□ -0.23
TSFM-208ENST00000543727 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
TSFM-208ENST00000543727 Q56UQ5 140 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 DUSP18Q8NEJ0 188 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 PINX1Q96BK5 328 aaKnown RBP13.64□□□□□ -0.23
TSFM-208ENST00000543727 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
TSFM-208ENST00000543727 SORL1Q92673 2214 aa13.64□□□□□ -0.23
TSFM-208ENST00000543727 F8W735 103 aaPredicted RBP13.63□□□□□ -0.23
TSFM-208ENST00000543727 CSN3P07498 182 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 HOXB5P09067 269 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 NPY1RP25929 384 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 OPRK1P41145 380 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 MARC2Q969Z3 335 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 ZNF256Q9Y2P7 627 aaPredicted RBP13.63□□□□□ -0.23
TSFM-208ENST00000543727 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
TSFM-208ENST00000543727 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 NDUFA4O00483 81 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 GNG7O60262 68 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 SLC25A4P12235 298 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 UBAC2Q8NBM4 344 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
TSFM-208ENST00000543727 RBKSQ9H477 322 aa13.62□□□□□ -0.23
TSFM-208ENST00000543727 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
TSFM-208ENST00000543727 C2orf70A6NJV1 201 aa13.61□□□□□ -0.23
TSFM-208ENST00000543727 CTSGP08311 255 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms