RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 VCX3AQ9NNX9 186 aa14.45□□□□□ -0.1
CACNA1C-230ENST00000543114 VPS13DQ5THJ4 4388 aa14.45□□□□□ -0.1
CACNA1C-230ENST00000543114 A0A087WXM4 84 aa14.44□□□□□ -0.1
CACNA1C-230ENST00000543114 M0QYG6 137 aa14.44□□□□□ -0.1
CACNA1C-230ENST00000543114 HSPE1P61604 102 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-230ENST00000543114 GBGT1Q8N5D6 347 aa14.44□□□□□ -0.1
CACNA1C-230ENST00000543114 C6orf62Q9GZU0 229 aaPredicted RBP14.44□□□□□ -0.1
CACNA1C-230ENST00000543114 TRAV14DV4A0A0A6YYC5 116 aa14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 GNG7O60262 68 aa14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 ELK1P19419 428 aa14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 TMEM217Q8N7C4 229 aa14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 FUNDC2Q9BWH2 189 aa14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 KLK5Q9Y337 293 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-230ENST00000543114 SMIM31A0A1B0GVY4 71 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 HPGDSO60760 199 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 IGKV1-5P01602 117 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 PI3P19957 117 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 VBP1P61758 197 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 TOMM20LQ6UXN7 152 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 PHLDA1Q8WV24 401 aaPredicted RBP14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 ST8SIA2Q92186 375 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 CMTM3Q96MX0 182 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 CSTL1Q9H114 145 aa14.42□□□□□ -0.1
CACNA1C-230ENST00000543114 MPTX1A8MV57 137 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 TNFAIP8O95379 198 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 ERHP84090 104 aaKnown RBP14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 TCF24Q7RTU0 167 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 TP53RKQ96S44 253 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 GINS3Q9BRX5 216 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 ZFAND3Q9H8U3 227 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 DNAH6Q9C0G6 4158 aa14.41□□□□□ -0.1
CACNA1C-230ENST00000543114 IGHV3-66A0A0C4DH42 116 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 APOHP02749 345 aaPredicted RBP14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 P0C879 139 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 RND3P61587 244 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 LHFPL1Q86WI0 220 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 LILRB2Q8N423 598 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 VSIRQ9H7M9 311 aa14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.1
CACNA1C-230ENST00000543114 ST8SIA3O43173 380 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 PGAM2P15259 253 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 AKR1C2P52895 323 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 PIGPP57054 158 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 RPP25LQ8N5L8 163 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 FAM24BQ8N5W8 94 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 GATAD1Q8WUU5 269 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 RARRES2Q99969 163 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 KLK11Q9UBX7 282 aa14.39□□□□□ -0.11
CACNA1C-230ENST00000543114 A0A0B4J293 547 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 A0A1B0GU03 582 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 INS-IGF2F8WCM5 200 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 NPBWR1P48145 328 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 CMC4P56277 68 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 RNASE10Q5GAN6 216 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 LEMD1Q68G75 181 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 ZNF600Q6ZNG1 722 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 DUSP18Q8NEJ0 188 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 ZNF486Q96H40 463 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 MS4A6AQ9H2W1 248 aa14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 C11orf68Q9H3H3 251 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-230ENST00000543114 AGRNO00468 2067 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 DEDDO75618 318 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 DFFBO76075 338 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 CD3DP04234 171 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 SNCAP37840 140 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 PPP5CP53041 499 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 PAFAH1B2P68402 229 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 PVRIGQ6DKI7 326 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 OR11H2Q8NH07 326 aa14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 MRPL36Q9P0J6 103 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-230ENST00000543114 FAM25AB3EWG3 89 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 FAM25CB3EWG5 89 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 FAM25GB3EWG6 89 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 IFNA17P01571 189 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 CD5P06127 495 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 RNASE2P10153 161 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 DEFB131AP59861 70 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 NANOS2P60321 138 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 ARRDC1Q8N5I2 433 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 OR52I2Q8NH67 350 aa14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
CACNA1C-230ENST00000543114 A0A0G2JRQ6 117 aa14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 C3orf85A0A1B0GTC6 90 aa14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 TMEM50AO95807 157 aa14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 HOXA1P49639 335 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 RORCP51449 518 aa14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
CACNA1C-230ENST00000543114 TRAV2A0A0B4J234 112 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 DNASE2O00115 360 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 DEFB4AO15263 64 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 ETV6P41212 452 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 RPL11P62913 178 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 TRIM16LQ309B1 348 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 SP6Q3SY56 376 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 C11orf45Q8TAV5 145 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 PDCD10Q9BUL8 212 aa14.34□□□□□ -0.11
CACNA1C-230ENST00000543114 NAA50Q9GZZ1 169 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms