RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 EFEMP2O95967 443 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 ATP5J2P56134 94 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 FLVCR1-AS1Q8TAF5 88 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 APC2O95996 2303 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
TNC-212ENST00000542877 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
TNC-212ENST00000542877 C5orf30Q96GV9 206 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 CLDN16Q9Y5I7 305 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 OR10J3Q5JRS4 329 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 AHCTF1Q8WYP5 2266 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 MYOFQ9NZM1 2061 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 TSPAN13O95857 204 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 NEU4Q8WWR8 484 aaPredicted RBP10.97□□□□□ -0.65
TNC-212ENST00000542877 VWCEQ96DN2 955 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 MORN2Q502X0 79 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 SBF2Q86WG5 1849 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 TRAV9-2A0A087WT02 112 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 PAX1P15863 534 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 LINC01560Q8TB33 94 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 ZNF418Q8TF45 676 aaPredicted RBP10.97□□□□□ -0.65
TNC-212ENST00000542877 EPDR1Q9UM22 224 aa10.97□□□□□ -0.65
TNC-212ENST00000542877 LHX2P50458 406 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 CD69Q07108 199 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 KLRB1Q12918 225 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 LINC00469Q8N7U9 141 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 WDR83OSQ9Y284 106 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 MTCL1Q9Y4B5 1905 aaKnown RBP10.96□□□□□ -0.65
TNC-212ENST00000542877 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.65
TNC-212ENST00000542877 C2orf88Q9BSF0 95 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 SEMA5BQ9P283 1151 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 S4R3C0 116 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 PATJQ8NI35 1801 aa10.96□□□□□ -0.65
TNC-212ENST00000542877 A0A1B0GW64 132 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 NAPSAO96009 420 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 UMODP07911 640 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 TMEM101Q96IK0 257 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 ASCL2Q99929 193 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 ZNF319Q9P2F9 582 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 C17orf100A8MU93 164 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 FABP5P3A8MUU1 101 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 H3BRM9 83 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 IGKV3-20P01619 116 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 CD55P08174 381 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 CELA3BP08861 270 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 OR4X2Q8NGF9 303 aa10.96□□□□□ -0.66
TNC-212ENST00000542877 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 IGKV1D-8A0A087WSZ0 117 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 TCRBV4S1A1TA0A5B7 111 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 COLCA2A8K830 154 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 LDLRAD4O15165 306 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 MUC21Q5SSG8 566 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 C10orf126Q8N4M7 172 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 ATXN7O15265 892 aaPredicted RBP10.95□□□□□ -0.66
TNC-212ENST00000542877 RAMP3O60896 148 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
TNC-212ENST00000542877 BSPH1Q075Z2 132 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 SPOCK3Q9BQ16 436 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 LEPP41159 167 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 HIST1H2BLQ99880 126 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
TNC-212ENST00000542877 RALGAPA2Q2PPJ7 1873 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 IGKV3OR2-268A0A0C4DH90 116 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 GNG5P63218 68 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 EFNB3Q15768 340 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 CYTL1Q9NRR1 136 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 PSMB11A5LHX3 300 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 LINC00614P0C842 121 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 HBDP02042 147 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
TNC-212ENST00000542877 SSBP4Q9BWG4 385 aaPredicted RBP10.94□□□□□ -0.66
TNC-212ENST00000542877 H3BUT2 72 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 NBR2O15453 112 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 CRYGSP22914 178 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 FAM169BQ8N8A8 192 aa10.94□□□□□ -0.66
TNC-212ENST00000542877 TMEM50AO95807 157 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 PPBPP02775 128 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 HIST3H2BBQ8N257 126 aa10.93□□□□□ -0.66
TNC-212ENST00000542877 CHCHD1Q96BP2 118 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms