RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 RAB29O14966 203 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 NXPH2O95156 264 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 GRPP07492 148 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 CECR9P0C854 216 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 CRYBB3P26998 211 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 CDKN1BP46527 198 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 GUSBP1Q15486 140 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 PDLIM3Q53GG5 364 aaPredicted RBP7.5□□□□□ -1.21
THBS3-211ENST00000541990 C1orf185Q5T7R7 199 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 PQLC2Q6ZP29 291 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 MOB1BQ7L9L4 216 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 DUSP13Q9UII6 198 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 PSG11Q9UQ72 335 aa7.5□□□□□ -1.21
THBS3-211ENST00000541990 USP9XQ93008 2570 aaPredicted RBP7.5□□□□□ -1.21
THBS3-211ENST00000541990 FAM90A27PA6NNH2 459 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 PRSS46E5RG02 174 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 PROP1O75360 226 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 CXorf1O96002 111 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 ERVK11-1P61568 191 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 SLAQ13239 276 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 UBE2V1Q13404 147 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 SPRNQ5BIV9 151 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 MIR17HGQ75NE6 70 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 OR4P4Q8NGL7 312 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 SLC25A40Q8TBP6 338 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 FAM57AQ8TBR7 257 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 NEUROG1Q92886 237 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 COX11Q9Y6N1 276 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 KMT2BQ9UMN6 2715 aaPredicted RBP7.49□□□□□ -1.21
THBS3-211ENST00000541990 PRRG2O14669 202 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 MYOD1P15172 320 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 S100A7P31151 101 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 OPRK1P41145 380 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 UQCRFS1P47985 274 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 KLF3P57682 345 aaPredicted RBP7.49□□□□□ -1.21
THBS3-211ENST00000541990 EFNB3Q15768 340 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 FAM168AQ92567 244 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 GNB1LQ9BYB4 327 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 PKIBQ9C010 78 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 CDC42EP3Q9UKI2 254 aa7.49□□□□□ -1.21
THBS3-211ENST00000541990 TET2Q6N021 2002 aaPredicted RBP7.49□□□□□ -1.21
THBS3-211ENST00000541990 A0A1W2PN81 502 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 HAND1O96004 215 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 TOMM40O96008 361 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 PRRX1P54821 245 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 CX3CL1P78423 397 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 TMEM249Q2WGJ8 235 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 Q56UQ5 140 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 UTF1Q5T230 341 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 EBLN2Q6P2I7 272 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 MOB3BQ86TA1 216 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 GALMQ96C23 342 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 COQ2Q96H96 371 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 SSBP3Q9BWW4 388 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 MBD3L4A6NDZ8 208 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 MBD3L3A6NE82 208 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 MBD3L5A6NJ08 208 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 K7EP13 123 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 FCGR3BO75015 233 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 GATA2P23769 480 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 HOXC12P31275 282 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 GABRA2P47869 451 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 CATR1Q13166 79 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 OR4F17Q8NGA8 305 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 OR13A1Q8NGR1 328 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 MBD3L2Q8NHZ7 208 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 ZC2HC1AQ96GY0 325 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 PLSCR4Q9NRQ2 329 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 TECRQ9NZ01 308 aaKnown RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 MPC1Q9Y5U8 109 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 IGHV1-18A0A0C4DH31 117 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 SH2D7A6NKC9 451 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 IGLL1P15814 213 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 TNXAQ16473 311 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 FBLN7Q53RD9 439 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 GDF5OSQ5U4N7 250 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 BHLHA15Q7RTS1 189 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 FAM216AQ8WUB2 273 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 C11orf52Q96A22 123 aa7.48□□□□□ -1.21
THBS3-211ENST00000541990 HEYLQ9NQ87 328 aaPredicted RBP7.48□□□□□ -1.21
THBS3-211ENST00000541990 LRRK2Q5S007 2527 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
THBS3-211ENST00000541990 TRGV10A0A0A0MS01 117 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 IGFBP2P18065 325 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 VDAC2P45880 294 aaPredicted RBP7.47□□□□□ -1.21
THBS3-211ENST00000541990 GPR6P46095 362 aaPredicted RBP7.47□□□□□ -1.21
THBS3-211ENST00000541990 GNG4P50150 75 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 PRAMEF5Q5TYX0 476 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 PRAMEF6Q5VXH4 476 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 GSX1Q9H4S2 264 aaPredicted RBP7.47□□□□□ -1.21
THBS3-211ENST00000541990 POLQO75417 2590 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 SAA2-SAA4A0A096LPE2 208 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 IGHV2OR16-5A0A0B4J2B6 119 aa7.47□□□□□ -1.21
THBS3-211ENST00000541990 C9JCJ5 164 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms