RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
CD4-210ENST00000541982 COMMD3Q9UBI1 195 aa11.41□□□□□ -0.58
CD4-210ENST00000541982 IGLL5B9A064 214 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 RCVRNP35243 200 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 RELQ04864 619 aaPredicted RBP11.4□□□□□ -0.58
CD4-210ENST00000541982 H2BFWTQ7Z2G1 175 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 TXN2Q99757 166 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 SMPXQ9UHP9 88 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 APLNQ9ULZ1 77 aa11.4□□□□□ -0.58
CD4-210ENST00000541982 FAT2Q9NYQ8 4349 aa11.39□□□□□ -0.59
CD4-210ENST00000541982 NUPL2O15504 423 aaKnown RBP11.39□□□□□ -0.59
CD4-210ENST00000541982 MFAP4P55083 255 aa11.39□□□□□ -0.59
CD4-210ENST00000541982 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
CD4-210ENST00000541982 IGHV7-4-1A0A0J9YVY3 117 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 I3L2K1 104 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 ZNF207O43670 478 aaKnown RBP11.38□□□□□ -0.59
CD4-210ENST00000541982 IGKV1-39P01597 117 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 IGKV1D-39P04432 117 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 CTSDP07339 412 aaPredicted RBP11.38□□□□□ -0.59
CD4-210ENST00000541982 HSPE1P61604 102 aaKnown RBP11.38□□□□□ -0.59
CD4-210ENST00000541982 NCS1P62166 190 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 SNX29P2Q8IUI4 249 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 ZNF414Q96IQ9 312 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 FUNDC2Q9BWH2 189 aa11.38□□□□□ -0.59
CD4-210ENST00000541982 DNAH2Q9P225 4427 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 IGHV3OR16-8A0A075B7F1 116 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 A0A1B0GVY2 172 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 CHEK1O14757 476 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 ELK1P19419 428 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 RND3P61587 244 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
CD4-210ENST00000541982 TMEM116Q8NCL8 245 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 MISP3Q96FF7 219 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
CD4-210ENST00000541982 RNF2Q99496 336 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
CD4-210ENST00000541982 NXF2Q9GZY0 626 aaKnown RBP11.37□□□□□ -0.59
CD4-210ENST00000541982 HPGDSO60760 199 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 MT-CO2P00403 227 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 RORCP51449 518 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 VBP1P61758 197 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 MRGPRFQ96AM1 343 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 HRH4Q9H3N8 390 aa11.36□□□□□ -0.59
CD4-210ENST00000541982 TRAV14DV4A0A0A6YYC5 116 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 YIF1AO95070 293 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 CD5P06127 495 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 TMEM187Q14656 261 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 MZT2AQ6P582 158 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
CD4-210ENST00000541982 PRSS29PA6NIE9 313 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 M0QYG6 137 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 GNG7O60262 68 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
CD4-210ENST00000541982 NPBWR1P48145 328 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 ARRDC1Q8N5I2 433 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
CD4-210ENST00000541982 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 FAM25AB3EWG3 89 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 FAM25CB3EWG5 89 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 FAM25GB3EWG6 89 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 DEFB4AO15263 64 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 ATG12O94817 140 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 P0C879 139 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 PGAM2P15259 253 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 TBPP20226 339 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 PIGPP57054 158 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 ZNF124Q15973 351 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 RNASE10Q5GAN6 216 aaKnown RBP11.33□□□□□ -0.6
CD4-210ENST00000541982 PVRIGQ6DKI7 326 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 AP3S1Q92572 193 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
CD4-210ENST00000541982 KLK11Q9UBX7 282 aa11.33□□□□□ -0.6
CD4-210ENST00000541982 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
CD4-210ENST00000541982 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 A0A0B4J293 547 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 SNCAP37840 140 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 C15orf40Q8WUR7 153 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 MTFP1Q9UDX5 166 aa11.32□□□□□ -0.6
CD4-210ENST00000541982 IGHV4-4A0A075B6R2 117 aa11.31□□□□□ -0.6
CD4-210ENST00000541982 CORTO00230 105 aa11.31□□□□□ -0.6
CD4-210ENST00000541982 CD3DP04234 171 aa11.31□□□□□ -0.6
CD4-210ENST00000541982 ZNF182P17025 639 aaPredicted RBP11.31□□□□□ -0.6
CD4-210ENST00000541982 TFPI2P48307 235 aa11.31□□□□□ -0.6
CD4-210ENST00000541982 AKR1C2P52895 323 aa11.31□□□□□ -0.6
CD4-210ENST00000541982 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
CD4-210ENST00000541982 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms