RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 RAD50Q92878 1312 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 DLG5Q8TDM6 1919 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 IGLV3-9A0A075B6K5 115 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 GOLGA6L10A6NI86 522 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 OR5K4A6NMS3 321 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 SMLR1H3BR10 107 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 CCL3P10147 92 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 HIST1H1CP16403 213 aaKnown RBP0.89□□□□□ -2.27
PRKDC-210ENST00000541488 CD24P25063 80 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 PSMB6P28072 239 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 OR10J1P30954 320 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 HERVK_113P63121 156 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 HOXC5Q00444 222 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 HLA-DRB5Q30154 266 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 DNAL1Q4LDG9 190 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 PABPC1L2AQ5JQF8 200 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 SPATA31B1PQ5VZV4 182 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 LGALS9CQ6DKI2 356 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 LCN8Q6JVE9 175 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 AMTNQ6UX39 209 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 BOD1L2Q8IYS8 172 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 MIEN1Q9BRT3 115 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 DCUN1D5Q9BTE7 237 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 PECRQ9BY49 303 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 SLC22A4Q9H015 551 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 WDR54Q9H977 334 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 EMC3Q9P0I2 261 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 KLK5Q9Y337 293 aaPredicted RBP0.89□□□□□ -2.27
PRKDC-210ENST00000541488 PUS1Q9Y606 427 aaKnown RBP eCLIP0.89□□□□□ -2.27
PRKDC-210ENST00000541488 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
PRKDC-210ENST00000541488 FLG2Q5D862 2391 aaPredicted RBP0.89□□□□□ -2.27
PRKDC-210ENST00000541488 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 COL7A1Q02388 2944 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 WNK1Q9H4A3 2382 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 OR11H12B2RN74 326 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 UBE2L6O14933 153 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 GNRH2O43555 120 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 CALUO43852 315 aaPredicted RBP0.88□□□□□ -2.27
PRKDC-210ENST00000541488 NDUFS6O75380 124 aaKnown RBP0.88□□□□□ -2.27
PRKDC-210ENST00000541488 ATP6V1G2O95670 118 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 MT-CO2P00403 227 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 IGHV1-69P01742 117 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 ATP5G1P05496 136 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 UCHL1P09936 223 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 RD3LP0DJH9 198 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 CYBAP13498 195 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 XCL1P47992 114 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 DAPP51397 102 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 ZNF90Q03938 601 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 RELAQ04206 551 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 TMEM267Q0VDI3 215 aaPredicted RBP0.88□□□□□ -2.27
PRKDC-210ENST00000541488 C4orf26Q17RF5 130 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 HSP90B2PQ58FF3 399 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 MESTQ5EB52 335 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 DNM1P34Q6PK57 102 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 AGTRAPQ6RW13 159 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 PLEKHG7Q6ZR37 379 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 C2orf91Q6ZV80 131 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 GLT6D1Q7Z4J2 308 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 ATP5L2Q7Z4Y8 100 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 LHFPL1Q86WI0 220 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 CD302Q8IX05 232 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 SLC35F6Q8N357 371 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 CNEP1R1Q8N9A8 125 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 OR11H2Q8NH07 326 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 OR10D3Q8NH80 312 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 Q8WTZ3 238 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 PPCDCQ96CD2 204 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 PACRGQ96M98 296 aaPredicted RBP0.88□□□□□ -2.27
PRKDC-210ENST00000541488 OR52B2Q96RD2 323 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 MROQ9BYG7 248 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 PRO2289Q9P1D8 64 aa0.88□□□□□ -2.27
PRKDC-210ENST00000541488 MYH3P11055 1940 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 PTPRDP23468 1912 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 DYNC2H1Q8NCM8 4307 aaKnown RBP0.87□□□□□ -2.27
PRKDC-210ENST00000541488 A0A0G2JQZ4 141 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 ARRDC5A6NEK1 342 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 C11orf86A6NJI1 115 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 SIGLEC16A6NMB1 481 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 MRASO14807 208 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 HPGDSO60760 199 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 ALOX5APP20292 161 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 CRYBB3P26998 211 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 DDTP30046 118 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 GRPRP30550 384 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 CASQ1P31415 396 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 CD151P48509 253 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 HINT1P49773 126 aaPredicted RBP0.87□□□□□ -2.27
PRKDC-210ENST00000541488 FABP5Q01469 135 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 MGAT3Q09327 533 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 SMAGPQ0VAQ4 97 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 DRAM2Q6UX65 266 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 Q6ZTI0 123 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 FAM19A5Q7Z5A7 132 aaPredicted RBP0.87□□□□□ -2.27
PRKDC-210ENST00000541488 ASB13Q8WXK3 278 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 SLC35G5Q96KT7 338 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 DHRS9Q9BPW9 319 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 TIPINQ9BVW5 301 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 TMEM222Q9H0R3 208 aa0.87□□□□□ -2.27
PRKDC-210ENST00000541488 HES4Q9HCC6 221 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms