RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SMUG1Q53HV7 270 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 KDM4DQ6B0I6 523 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 SLC7A5P1Q8MH63 180 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 TRIM63Q969Q1 353 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 RNF125Q96EQ8 232 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 ZNF486Q96H40 463 aaPredicted RBP6.54□□□□□ -1.36
YBX3-211ENST00000541351 METTL26Q96S19 204 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 SLC29A1Q99808 456 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 NXF2Q9GZY0 626 aaKnown RBP6.54□□□□□ -1.36
YBX3-211ENST00000541351 DIABLOQ9NR28 239 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 ERVK13-1Q9NX77 482 aa6.54□□□□□ -1.36
YBX3-211ENST00000541351 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
YBX3-211ENST00000541351 F11RQ9Y624 299 aaKnown RBP6.54□□□□□ -1.36
YBX3-211ENST00000541351 TRAV9-2A0A087WT02 112 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 IGKV1-6A0A0C4DH72 117 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 H3BMM0 161 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 J3QRK9 145 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 RAB27BO00194 218 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 TRAPPC2P0DI81 140 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 TRAPPC2BP0DI82 140 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 M6PRP20645 277 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 ASIPP42127 132 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 GABARAPL2P60520 117 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 DHRS2Q13268 280 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 OR2B11Q5JQS5 317 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 TMPRSS11AQ6ZMR5 421 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 OR4C16Q8NGL9 310 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 DCANP1Q8TF63 244 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 TCTEX1D2Q8WW35 142 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 SMIM19Q96E16 107 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 GNPNAT1Q96EK6 184 aaPredicted RBP6.53□□□□□ -1.36
YBX3-211ENST00000541351 C5orf30Q96GV9 206 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
YBX3-211ENST00000541351 HDHD3Q9BSH5 251 aaPredicted RBP6.53□□□□□ -1.36
YBX3-211ENST00000541351 TMEM208Q9BTX3 173 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
YBX3-211ENST00000541351 TRAV8-7A0A075B6U6 113 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 IGHV3-21A0A0B4J1V1 117 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 TRBV5-5A0A0J9YX44 114 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 CBY3A6NI87 242 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 CDK1P06493 297 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 HLA-DRB4P13762 266 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 ZNF182P17025 639 aaPredicted RBP6.52□□□□□ -1.37
YBX3-211ENST00000541351 MAPK3P27361 379 aaPredicted RBP6.52□□□□□ -1.37
YBX3-211ENST00000541351 GNG2P59768 71 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 ST3GAL4Q11206 333 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 TIMM50Q3ZCQ8 353 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 DHRSXQ8N5I4 330 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 SUN5Q8TC36 379 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 LSM10Q969L4 123 aaKnown RBP6.52□□□□□ -1.37
YBX3-211ENST00000541351 MOB3AQ96BX8 217 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 ORAI1Q96D31 301 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 LGALS12Q96DT0 336 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 HLA-DRB4X5D2U9 266 aa6.52□□□□□ -1.37
YBX3-211ENST00000541351 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 K7EIM0 57 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 SIVA1O15304 175 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 PTTG1O95997 202 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 CD3GP09693 182 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 P2RY1P47900 373 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 NPBWR1P48145 328 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 B2MP61769 119 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 IFITM2Q01629 132 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 SPATA31B1PQ5VZV4 182 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 OR10K2Q6IF99 312 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 PRSS48Q7RTY5 328 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 TMEM56Q96MV1 263 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 CIB1Q99828 191 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 PRELID1Q9Y255 219 aa6.51□□□□□ -1.37
YBX3-211ENST00000541351 RBMX2Q9Y388 322 aaKnown RBP6.51□□□□□ -1.37
YBX3-211ENST00000541351 CGB1A6NKQ9 187 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 NPIPB6E9PJ23 425 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 K7EP13 123 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 ADAP1O75689 374 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 NQO2P16083 231 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 PPP5CP53041 499 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 TAS2R31P59538 309 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 OR10J6PQ8NGY7 276 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 OR1P1Q8NH06 330 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 RXFP4Q8TDU9 374 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 SLC25A46Q96AG3 418 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 GABARAPL3Q9BY60 117 aa6.5□□□□□ -1.37
YBX3-211ENST00000541351 LOC105371267A0A1B0GV96 52 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 FAM25AB3EWG3 89 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 FAM25CB3EWG5 89 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 FAM25GB3EWG6 89 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 M0QYG6 137 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 UPK2O00526 184 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 GABARAPO95166 117 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms