RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 GPR12P47775 334 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 BSPH1Q075Z2 132 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 OR2Z1Q8NG97 314 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 HSPB7Q9UBY9 170 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 WIPI2Q9Y4P8 454 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 TNCP24821 2201 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 HCFC1P51610 2035 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 DPRXA6NFQ7 191 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 COMPP49747 757 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 LOC105371242A0A075B767 164 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 MDFIC2A0A1B0GVS7 189 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 F6UZH7 168 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 HYPMO75409 117 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 CLDN14O95500 239 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 SRP14P37108 136 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 ERVK11-1P61568 191 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 RELBQ01201 579 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 RPL39P5Q59GN2 51 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 OCC1Q8TAD7 63 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 LRRC29Q8WV35 223 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 SFRP2Q96HF1 295 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 FXYD3Q14802 87 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 ZNF146Q15072 292 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 FAM201AQ5SY85 155 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 SCO2A0A1W2PP80 73 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 LDLRAD2Q5SZI1 272 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 TIMM8BQ9Y5J9 83 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-210ENST00000541286 IGHV2OR16-5A0A0B4J2B6 119 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 OR9G9P0C7N8 305 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 MIC13Q5XKP0 118 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 AGMATQ9BSE5 352 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 GNB4Q9HAV0 340 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 NRN1Q9NPD7 142 aa11.77□□□□□ -0.52
SFSWAP-210ENST00000541286 SPINT2O43291 252 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 SVIPQ8NHG7 77 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 JKAMPQ9P055 326 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 TRAV3A0A0B4J244 114 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 ACTL6BO94805 426 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 IGKV3-15P01624 115 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 CD1BP29016 333 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 NRGNQ92686 78 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 NAT8BQ9UHF3 227 aa11.77□□□□□ -0.53
SFSWAP-210ENST00000541286 UNC79Q9P2D8 2635 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 SELENOTP62341 195 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 MRPL54Q6P161 138 aaKnown RBP11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 NPIPB11E5RHQ5 1161 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 LY6HO94772 140 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 ACP7Q6ZNF0 438 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
SFSWAP-210ENST00000541286 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 RRHO14718 337 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 ATP6V1FQ16864 119 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 FAM90A26D6RGX4 464 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 TYMSP04818 313 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 Q56UQ5 140 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 MCRIP2Q9BUT9 160 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNF253O75346 499 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 HTD2P86397 168 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 UBE2V1Q13404 147 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 HIPK2Q9H2X6 1198 aa11.75□□□□□ -0.53
SFSWAP-210ENST00000541286 H0Y8G0 127 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 MYOD1P15172 320 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 CD40P25942 277 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 ERVK-16P61578 105 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 TIMM23BQ5SRD1 257 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 UTF1Q5T230 341 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 ACANP16112 2415 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
SFSWAP-210ENST00000541286 IQCF6A8MYZ5 107 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms