RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ZFAND1Q8TCF1 268 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 FCAMRQ8WWV6 532 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 DGCR14Q96DF8 476 aaKnown RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 CXorf58Q96LI9 332 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 OR5B12Q96R08 314 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ATP6V0BQ99437 205 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 B9D2Q9BPU9 175 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 CACFD1Q9UGQ2 172 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 PRNDQ9UKY0 176 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 TRRAPQ9Y4A5 3859 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 NBEAL1Q6ZS30 2694 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 A0A087WW49 117 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 PIGBOS1A0A0B4J2F0 54 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 K7EIL1 84 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 UPK2O00526 184 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 TNFSF12O43508 249 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 HPGDSO60760 199 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 GGCTO75223 188 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 NDUFB4O95168 129 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 IGHV3-11P01762 117 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 EIF4EP06730 217 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 ELK1P19419 428 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 HLA-DMAP28067 261 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 PSMB6P28072 239 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 HRH1P35367 487 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 TAS2R19P59542 299 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 RHOGP84095 191 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 FAM106AQ4KMX7 169 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 RNASE10Q5GAN6 216 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 OR2B11Q5JQS5 317 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 IDO2Q6ZQW0 420 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 SNX29P2Q8IUI4 249 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 TMEM229BQ8NBD8 167 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 OR9G4Q8NGQ1 327 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 OR1L8Q8NGR8 309 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 OR5B3Q8NH48 314 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 EEF1AKMT3Q96AZ1 226 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 RBMXL1Q96E39 390 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 TMEM56Q96MV1 263 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 EXTL2Q9UBQ6 330 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 MTFP1Q9UDX5 166 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 LSM4Q9Y4Z0 139 aaKnown RBP4.35□□□□□ -1.71
SUDS3-202ENST00000541280 SMAD5-AS1Q9Y6J3 95 aa4.35□□□□□ -1.71
SUDS3-202ENST00000541280 MEIS3P1A6NDR6 274 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 A8MZ25 164 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TEX22C9J3V5 150 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 GABARAPH6UMI1 98 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 LGALS9O00182 355 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 CTDSPLO15194 276 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 RGS5O15539 181 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 FCER2P06734 321 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 SERPINE2P07093 398 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TRAPPC2P0DI81 140 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TRAPPC2BP0DI82 140 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 SMIM18P0DKX4 95 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 PTHLHP12272 177 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 GP9P14770 177 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 CTRB1P17538 263 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TGFBR1P36897 503 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 LPAR6P43657 344 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 RND3P61587 244 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 MEF2DQ14814 521 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 SURF2Q15527 256 aaPredicted RBP4.34□□□□□ -1.71
SUDS3-202ENST00000541280 C15orf32Q32M92 178 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 CTRB2Q6GPI1 263 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 OR4A47Q6IF82 309 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 LCN12Q6JVE5 192 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 LAX1Q8IWV1 398 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 VKORC1L1Q8N0U8 176 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 Q8N402 240 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 OR51H1Q8NH63 302 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TERB2Q8NHR7 220 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 VN1R17PQ8TDU5 208 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 CASTOR1Q8WTX7 329 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 SCGB3A2Q96PL1 93 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 ALX4Q9H161 411 aaPredicted RBP4.34□□□□□ -1.71
SUDS3-202ENST00000541280 PALMDQ9NP74 551 aa4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
SUDS3-202ENST00000541280 CCDC59Q9P031 241 aaKnown RBP4.34□□□□□ -1.71
SUDS3-202ENST00000541280 RSL24D1Q9UHA3 163 aaKnown RBP4.34□□□□□ -1.71
SUDS3-202ENST00000541280 TET2Q6N021 2002 aaPredicted RBP4.33□□□□□ -1.72
SUDS3-202ENST00000541280 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 DISC1C4P0D8 188 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 KRASP01116 189 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 IGLV1-51P01701 117 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 CD74P04233 296 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 RLN1P04808 185 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 SPNP16150 400 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 SYNJ2BPP57105 145 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 OR2B8PP59922 312 aa4.33□□□□□ -1.72
SUDS3-202ENST00000541280 ERHP84090 104 aaKnown RBP4.33□□□□□ -1.72
SUDS3-202ENST00000541280 EXOSC2Q13868 293 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms