RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 GCSAMLQ5JQS6 135 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 C1orf162Q8NEQ5 155 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 COL4A5P29400 1685 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 TRAV8-2A0A0B4J237 113 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 APOMO95445 188 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 WBP1Q96G27 269 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 CD55P08174 381 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 FTH1P19P0C7X4 201 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNF56Q15929 161 aa12.53□□□□□ -0.4
SMARCA4-207ENST00000541122 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 IGHV3-48P01763 117 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 GAGE13Q4V321 117 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNF585BQ52M93 769 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNRF1Q8ND25 227 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 FGF11Q92914 225 aa12.52□□□□□ -0.4
SMARCA4-207ENST00000541122 GLRXP35754 106 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 ATP5G2Q06055 141 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 TCRBV4S1A1TA0A5B7 111 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 LINC01549A6NIU2 74 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 A0A1W2PR77 199 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 CACNG7P62955 275 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
SMARCA4-207ENST00000541122 EREGO14944 169 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 CD69Q07108 199 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 ASCL2Q99929 193 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 RP1P56715 2156 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 A0A0G2JLM5 398 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 A8MWV9 139 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 IGKCP01834 107 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 MOB4Q9Y3A3 225 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 C3orf79P0CE67 100 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 SLC25A48Q6ZT89 311 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 COQ2Q96H96 371 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 SEMA5BQ9P283 1151 aa12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 NYNRINQ9P2P1 1898 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-207ENST00000541122 RSPO4Q2I0M5 234 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 TREML4Q6UXN2 200 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 DNASE2BQ8WZ79 361 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 DDB2Q92466 427 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 KNTC1P50748 2209 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 CD5LO43866 347 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 NDUFA3O95167 84 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 QRFPP83859 136 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 DEFB123Q8N688 67 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 ESDP10768 282 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 CRYGSP22914 178 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
SMARCA4-207ENST00000541122 H3BRM9 83 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 DEPPQ9NTK1 212 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 RAMP3O60896 148 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 ORMDL2Q53FV1 153 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 RTN4RL2Q86UN3 420 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 FLVCR1-AS1Q8TAF5 88 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 SIPA1L1O43166 1804 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 GNG5P63218 68 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 Q0VG73 95 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 CDCP2Q5VXM1 449 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 PSME4Q14997 1843 aa12.49□□□□□ -0.41
SMARCA4-207ENST00000541122 E9PQ18 207 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PF4V1P10720 104 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 TIMP4Q99727 224 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 IGLV3-12A0A075B6K2 115 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 Q6ZS49 121 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PPP1R32Q7Z5V6 425 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 MRPL20Q9BYC9 149 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 DOCK4Q8N1I0 1966 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PSG7Q13046 419 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 MORN2Q502X0 79 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 C21orf62Q9NYP8 219 aa12.48□□□□□ -0.41
SMARCA4-207ENST00000541122 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms