RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 A0A0B4J2A0 478 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 IGHV3-35A0A0C4DH35 117 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 ZNF320A2RRD8 509 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 NDUFB6O95139 128 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 IGHV3-48P01763 117 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 SULT1A3P0DMM9 295 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 SULT1A4P0DMN0 295 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 SPNP16150 400 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 SPCS3P61009 180 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 PPP1R1AQ13522 171 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 FAM106AQ4KMX7 169 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 Q56UQ5 140 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 GPHB5Q86YW7 130 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 ZNF114Q8NC26 417 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 SHPKQ9UHJ6 478 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
SNHG1-215ENST00000540904 PIGBOS1A0A0B4J2F0 54 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 INS-IGF2F8WCM5 200 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 I3L2K1 104 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 LGALS9O00182 355 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 TGOLN2O43493 480 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 SFT2D2O95562 160 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 MT-CO2P00403 227 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 SUB1P53999 127 aaKnown RBP eCLIP7.02□□□□□ -1.29
SNHG1-215ENST00000540904 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 ANKRD55Q3KP44 614 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 AARDQ4LEZ3 155 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 NMSQ5H8A3 153 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 BSCL2Q96G97 398 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-215ENST00000540904 C7orf50Q9BRJ6 194 aaKnown RBP7.02□□□□□ -1.29
SNHG1-215ENST00000540904 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 FLVCR2Q9UPI3 526 aa7.02□□□□□ -1.29
SNHG1-215ENST00000540904 C2orf70A6NJV1 201 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 CEBPZOSA8MTT3 80 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 F8W735 103 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-215ENST00000540904 PLA2G10O15496 165 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 NUPL2O15504 423 aaKnown RBP7.01□□□□□ -1.29
SNHG1-215ENST00000540904 RNASE2P10153 161 aaKnown RBP7.01□□□□□ -1.29
SNHG1-215ENST00000540904 FOLR2P14207 255 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 GP9P14770 177 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 EDN2P20800 178 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 BTCP35070 178 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 MFAP4P55083 255 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 SPSB3Q6PJ21 355 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 UNQ9165/PRO28630Q6UXU0 137 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 ADAMTSL5Q6ZMM2 481 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 LINC00299Q6ZSB3 139 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 S100ZQ8WXG8 99 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 CACNG8Q8WXS5 425 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 CHRDL1Q9BU40 450 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 CCDC32Q9BV29 185 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 HEYLQ9NQ87 328 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-215ENST00000540904 GAR1Q9NY12 217 aaKnown RBP7.01□□□□□ -1.29
SNHG1-215ENST00000540904 PTTG2Q9NZH5 202 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 CACFD1Q9UGQ2 172 aa7.01□□□□□ -1.29
SNHG1-215ENST00000540904 IGHV3OR16-8A0A075B7F1 116 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 A0A1B0GU03 582 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 DUXBA0A1W2PPF3 345 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 TMEM213A2RRL7 107 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 C9orf170A2RU37 121 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 CORTO00230 105 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 LYRM1O43325 122 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 GNG7O60262 68 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 ANXA7P20073 488 aaKnown RBP7□□□□□ -1.29
SNHG1-215ENST00000540904 CBLN1P23435 193 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 ADMP35318 185 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 OPRK1P41145 380 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 HTR2BP41595 481 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 UBE2MP61081 183 aaKnown RBP7□□□□□ -1.29
SNHG1-215ENST00000540904 TNFRSF9Q07011 255 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 DCTN2Q13561 401 aaKnown RBP7□□□□□ -1.29
SNHG1-215ENST00000540904 C4orf46Q504U0 113 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 TM4SF20Q53R12 229 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 LCN12Q6JVE5 192 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 C11orf87Q6NUJ2 197 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 LRTM2Q8N967 370 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 OR1S1Q8NH92 325 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 ATP6V0BQ99437 205 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 TXN2Q99757 166 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 HIPK2Q9H2X6 1198 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 BATF3Q9NR55 127 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
SNHG1-215ENST00000540904 SELENOKQ9Y6D0 94 aa7□□□□□ -1.29
SNHG1-215ENST00000540904 IZUMO1RA6ND01 250 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 A8MWP6 167 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 YIF1AO95070 293 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 CTSGP08311 255 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 HOXB5P09067 269 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 OR4E1P0C645 316 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 RELQ04864 619 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-215ENST00000540904 CD69Q07108 199 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 DHRS2Q13268 280 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 MLANAQ16655 118 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 DEFB114Q30KQ6 69 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 BSXQ3C1V8 233 aa6.99□□□□□ -1.29
SNHG1-215ENST00000540904 CD300EQ496F6 205 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms