RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 SPATA3Q8NHX4 192 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 NANPQ8TBE9 248 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 WDR61Q9GZS3 305 aaKnown RBP11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 YAE1D1Q9NRH1 226 aa11.32□□□□□ -0.6
CYB561A3-216ENST00000540755 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 I3L521 148 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 SOX15O60248 233 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 CNIH1O95406 144 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 C9orf139Q6ZV77 190 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
CYB561A3-216ENST00000540755 SVEP1Q4LDE5 3571 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 FXYD3Q14802 87 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 PCNPQ8WW12 178 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 P2RX4Q99571 388 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 SSX3Q99909 188 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 RASL11BQ9BPW5 248 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 PSMG3Q9BT73 122 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 SH3BGRL3Q9H299 93 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
CYB561A3-216ENST00000540755 AREGP15514 252 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 ZP3P21754 424 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 CX3CL1P78423 397 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 SERF2P84101 59 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 SLC25A33Q9BSK2 321 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 PLA2G2EQ9NZK7 142 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 TIMM9Q9Y5J7 89 aa11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 SOX21Q9Y651 276 aaPredicted RBP11.29□□□□□ -0.6
CYB561A3-216ENST00000540755 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 MPDU1O75352 247 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 RUNX1Q01196 453 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
CYB561A3-216ENST00000540755 A6NDX4 124 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 H3BUX3 64 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 CORTO00230 105 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 REG1AP05451 166 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 CD69Q07108 199 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 ARSJQ5FYB0 599 aaPredicted RBP11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 BTNL8Q6UX41 500 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 RSG1Q9BU20 258 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 NPVFQ9HCQ7 196 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 PITPNC1Q9UKF7 332 aa11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.6
CYB561A3-216ENST00000540755 CTRB1P17538 263 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 FGF7P21781 194 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 RAB2AP61019 212 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 NDPQ00604 133 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 CTRB2Q6GPI1 263 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
CYB561A3-216ENST00000540755 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 TSPAN9O75954 239 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 PRH1P02810 166 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 CRYGCP07315 174 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 CAMLGP49069 296 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 MFAP2P55001 183 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 SLC16A13Q7RTY0 426 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 TMEM219Q86XT9 240 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 BCL6BQ8N143 479 aaPredicted RBP11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 OR1L6Q8NGR2 347 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 LSM4Q9Y4Z0 139 aaKnown RBP11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 RFNGQ9Y644 331 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
CYB561A3-216ENST00000540755 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms