RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
C2CD3-215ENST00000540452 A0A087WWC5 75 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 PDE6DO43924 150 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 NDUFS7O75251 213 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 IGKV1D-33P01593 117 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 IGKV1-33P01594 117 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 FAM106CPP0CH98 169 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 STAG3L2P0CL84 134 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 STAG3L3P0CL85 134 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 TAS2R45P59539 299 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 SRSF3P84103 164 aaKnown RBP6.65□□□□□ -1.34
C2CD3-215ENST00000540452 MEF2BQ02080 365 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-215ENST00000540452 WT1-ASQ06250 92 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 GAMTQ14353 236 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 HNF4GQ14541 408 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 ICAM4Q14773 271 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 MMDQ15546 238 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 C5orf64Q2M2E5 130 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 ZNF562Q6V9R5 426 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 PQLC2Q6ZP29 291 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 SLC16A13Q7RTY0 426 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 TMEM68Q96MH6 324 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 ZNF48Q96MX3 618 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-215ENST00000540452 PFDN5Q99471 154 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 SSX3Q99909 188 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 HINT2Q9BX68 163 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 SIRT7Q9NRC8 400 aa6.65□□□□□ -1.34
C2CD3-215ENST00000540452 BEX4Q9NWD9 120 aaPredicted RBP6.65□□□□□ -1.34
C2CD3-215ENST00000540452 RELNP78509 3460 aa6.65□□□□□ -1.35
C2CD3-215ENST00000540452 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 NPIPB5A8MRT5 1133 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TEX22C9J3V5 150 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 CLN5O75503 358 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 YIF1AO95070 293 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 FABP1P07148 127 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 SRP19P09132 144 aaKnown RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 OR5G3P0C626 314 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 OR13C7P0DN81 318 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 ELLP55199 621 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 ATP5J2P56134 94 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TNXAQ16473 311 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 S100A7AQ86SG5 101 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 STPG3Q8N7X2 389 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 OR1L4Q8NGR5 311 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 SRSF12Q8WXF0 261 aaKnown RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 EAF1Q96JC9 268 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TBX15Q96SF7 602 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 ATP6V0BQ99437 205 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TRGV9Q99603 122 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TCEAL7Q9BRU2 100 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 NIPSNAP3BQ9BS92 247 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 VSIRQ9H7M9 311 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TMEM167BQ9NRX6 74 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 TMEM242Q9NWH2 141 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 GNG13Q9P2W3 67 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 RNF24Q9Y225 148 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 FAM96BQ9Y3D0 163 aa6.64□□□□□ -1.35
C2CD3-215ENST00000540452 USP9YO00507 2555 aaPredicted RBP6.64□□□□□ -1.35
C2CD3-215ENST00000540452 POLQO75417 2590 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 HRNRQ86YZ3 2850 aaPredicted RBP6.63□□□□□ -1.35
C2CD3-215ENST00000540452 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 TCRBV4S1A1TA0A5B7 111 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 CXorf65A6NEN9 183 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 B4DSR2 109 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 C9JQL5 133 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 F6UZH7 168 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 J3QLI3 93 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 NPFFO15130 113 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 HLA-DRB1P01911 266 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 CTRB1P17538 263 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 PLP1P60201 277 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 CCL20P78556 96 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 LCN2P80188 198 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 PLGLAQ15195 96 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 LDLRAD2Q5SZI1 272 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 CTRB2Q6GPI1 263 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 LCN15Q6UWW0 184 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 CYP2G1PQ6ZSU1 146 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 STXBP6Q8NFX7 210 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 OR10W1Q8NGF6 305 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 MEGF9Q9H1U4 602 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 TMEM231Q9H6L2 316 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 SLC25A22Q9H936 323 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 SMCO4Q9NRQ5 59 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 THYN1Q9P016 225 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 FUT9Q9Y231 359 aa6.63□□□□□ -1.35
C2CD3-215ENST00000540452 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 E7EUB6 86 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 DNASE2O00115 360 aaPredicted RBP6.62□□□□□ -1.35
C2CD3-215ENST00000540452 MSMBP08118 114 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 LINC00869P0C866 280 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 AREGP15514 252 aa6.62□□□□□ -1.35
C2CD3-215ENST00000540452 HIST1H1BP16401 226 aaKnown RBP6.62□□□□□ -1.35
C2CD3-215ENST00000540452 FCGR2BP31994 310 aaPredicted RBP6.62□□□□□ -1.35
C2CD3-215ENST00000540452 CRIP2P52943 208 aaPredicted RBP6.62□□□□□ -1.35
C2CD3-215ENST00000540452 SSBP2P81877 361 aaPredicted RBP6.62□□□□□ -1.35
C2CD3-215ENST00000540452 GUCA2BQ16661 112 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms