RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MT-CO2P00403 227 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 NPBWR1P48145 328 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 RFX2P48378 723 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 TAS2R46P59540 309 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 LPCAT3Q6P1A2 487 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 H2BFWTQ7Z2G1 175 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 SPARTQ8N0X7 666 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 OR5H2Q8NGV7 314 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 RAB26Q9ULW5 256 aa9.11□□□□□ -0.95
COPS7A-211ENST00000540408 TRAV10A0A0B4J240 114 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 A0A1W2PS18 150 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 PMP2P02689 132 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 MIFP14174 115 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 MORN3Q6PF18 240 aaPredicted RBP9.1□□□□□ -0.95
COPS7A-211ENST00000540408 TOMM20LQ6UXN7 152 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 ZNF114Q8NC26 417 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 ST8SIA2Q92186 375 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 VSIRQ9H7M9 311 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 FAM212BQ9NTI7 297 aaPredicted RBP9.1□□□□□ -0.95
COPS7A-211ENST00000540408 RABAC1Q9UI14 185 aa9.1□□□□□ -0.95
COPS7A-211ENST00000540408 LOC100506127A0A0U1RQW1 187 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 IGHV3-48P01763 117 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 CLEC2LP0C7M8 214 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 HLA-DMBP28068 263 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 SNCAP37840 140 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 HSPE1P61604 102 aaKnown RBP9.09□□□□□ -0.95
COPS7A-211ENST00000540408 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 CROCCP3Q8IVE0 287 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 Q8NAQ8 132 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 ZNF414Q96IQ9 312 aa9.09□□□□□ -0.95
COPS7A-211ENST00000540408 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 IGHV3-66A0A0C4DH42 116 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 SCGB2A1O75556 95 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 SPP1P10451 314 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 NPPCP23582 126 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 SUB1P53999 127 aaKnown RBP eCLIP9.08□□□□□ -0.96
COPS7A-211ENST00000540408 TSPAN5P62079 268 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 PHLDA2Q53GA4 152 aa9.08□□□□□ -0.96
COPS7A-211ENST00000540408 NARS2Q96I59 477 aaKnown RBP9.08□□□□□ -0.96
COPS7A-211ENST00000540408 PUS1Q9Y606 427 aaKnown RBP eCLIP9.08□□□□□ -0.96
COPS7A-211ENST00000540408 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 APOHP02749 345 aaPredicted RBP9.07□□□□□ -0.96
COPS7A-211ENST00000540408 PRSS3P35030 304 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
COPS7A-211ENST00000540408 UBE2NLQ5JXB2 153 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 TMEM69Q5SWH9 247 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 STXBP6Q8NFX7 210 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 SEC22AQ96IW7 307 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 METTL26Q96S19 204 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 YTHDF1Q9BYJ9 559 aaKnown RBP9.07□□□□□ -0.96
COPS7A-211ENST00000540408 RNF167Q9H6Y7 350 aa9.07□□□□□ -0.96
COPS7A-211ENST00000540408 CORTO00230 105 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 TMEM50AO95807 157 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 RBMY1A1P0DJD3 496 aaKnown RBP9.06□□□□□ -0.96
COPS7A-211ENST00000540408 RBMY1CP0DJD4 496 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 NAT1P18440 290 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 HRH1P35367 487 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
COPS7A-211ENST00000540408 Q6ZTC4 211 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 TRPT1Q86TN4 253 aaKnown RBP9.06□□□□□ -0.96
COPS7A-211ENST00000540408 TBC1D26Q86UD7 250 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 FAM24BQ8N5W8 94 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 TMEM230Q96A57 120 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 GRAMD2BQ96HH9 432 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 PDCD10Q9BUL8 212 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 FXYD6Q9H0Q3 95 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 Q9H521 79 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 ANAPC10Q9UM13 185 aa9.06□□□□□ -0.96
COPS7A-211ENST00000540408 DNAH10Q8IVF4 4471 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 ZNF705EA8MWA4 302 aaPredicted RBP9.05□□□□□ -0.96
COPS7A-211ENST00000540408 IFNA17P01571 189 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 P0DMU3 169 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 NPY1RP25929 384 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 HLA-DMAP28067 261 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 TAS2R20P59543 309 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 NUTF2P61970 127 aaKnown RBP9.05□□□□□ -0.96
COPS7A-211ENST00000540408 KCTD21Q4G0X4 260 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 SLC35G3Q8N808 338 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 MRGPRFQ96AM1 343 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 HERC2O95714 4834 aa9.05□□□□□ -0.96
COPS7A-211ENST00000540408 DEFB131BA0A096LNP1 70 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 A0A1B0GU03 582 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 PRSS29PA6NIE9 313 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 K7EQG2 157 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 ATG12O94817 140 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
COPS7A-211ENST00000540408 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 P2RY1P47900 373 aa9.04□□□□□ -0.96
COPS7A-211ENST00000540408 AP2S1P53680 142 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms