RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 SPCS3P61009 180 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 RBMS2Q15434 407 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 ANKRD55Q3KP44 614 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 PVRIGQ6DKI7 326 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 C11orf87Q6NUJ2 197 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 PLET1Q6UQ28 207 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 CACNG8Q8WXS5 425 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 A0A0B4J2A0 478 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 ZNF320A2RRD8 509 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 NDUFB6O95139 128 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 NXPH3O95157 252 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 MT-CO2P00403 227 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 FOLR2P14207 255 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 SNCAP37840 140 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 PPP1R1AQ13522 171 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 FAM106AQ4KMX7 169 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 LGI3Q8N145 548 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 UBAC2Q8NBM4 344 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 PINX1Q96BK5 328 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 BSCL2Q96G97 398 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 SHPKQ9UHJ6 478 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 FLVCR2Q9UPI3 526 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 SELENOKQ9Y6D0 94 aa13.86□□□□□ -0.19
SNRPA1-203ENST00000540017 A8MWP6 167 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 PLA2G10O15496 165 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 SULT1A3P0DMM9 295 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 SULT1A4P0DMN0 295 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 ANXA3P12429 323 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 VAMP1P23763 118 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 TM4SF20Q53R12 229 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 Q56UQ5 140 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 CENPSQ8N2Z9 138 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 ZNF436Q9C0F3 470 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-203ENST00000540017 SFT2D2O95562 160 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 CTSGP08311 255 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 CBLN1P23435 193 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 SRPXP78539 464 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 CD300EQ496F6 205 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 Q8N1Y9 231 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 COL7A1Q02388 2944 aa13.84□□□□□ -0.19
SNRPA1-203ENST00000540017 MFAP4P55083 255 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 MLANAQ16655 118 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 LRTM2Q8N967 370 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 B9D2Q9BPU9 175 aa13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 FNDC4Q9H6D8 234 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-203ENST00000540017 CEBPZOSA8MTT3 80 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 FCGR2BP31994 310 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 DCTN2Q13561 401 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 LCN12Q6JVE5 192 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 UXS1Q8NBZ7 420 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 TMEM170AQ8WVE7 144 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 C7orf50Q9BRJ6 194 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 MRPL36Q9P0J6 103 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 MLXQ9UH92 298 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 SMAD5-AS1Q9Y6J3 95 aa13.82□□□□□ -0.2
SNRPA1-203ENST00000540017 IGHV3OR16-8A0A075B7F1 116 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 ZNF785A8K8V0 405 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 CENPXA8MT69 81 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 C8orf88P0DMB2 117 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 SUB1P53999 127 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 TNFRSF9Q07011 255 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 CD69Q07108 199 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 OR2K2Q8NGT1 345 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 TMEM190Q8WZ59 177 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 TXN2Q99757 166 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 HSPB7Q9UBY9 170 aa13.81□□□□□ -0.2
SNRPA1-203ENST00000540017 A0A1B0GU03 582 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 DUXBA0A1W2PPF3 345 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 C9orf170A2RU37 121 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 NDUFA4O00483 81 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 LYRM1O43325 122 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 PITX3O75364 302 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 ANXA7P20073 488 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 HTR2BP41595 481 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 RBKSQ9H477 322 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 PALMDQ9NP74 551 aa13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-203ENST00000540017 ELLP55199 621 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 UBE2MP61081 183 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 C2orf83Q53S99 150 aa13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 BTNL8Q6UX41 500 aa13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 WDR89Q96FK6 387 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 CCDC32Q9BV29 185 aa13.79□□□□□ -0.2
SNRPA1-203ENST00000540017 GAR1Q9NY12 217 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms