RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PSENENQ9NZ42 101 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 A0A1W2PN81 502 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 KANTRA0A1W2PQU2 76 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 FAM24AA6NFZ4 105 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 TSC22D2O75157 780 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 CNIH1O95406 144 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 TMEM50AO95807 157 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 PRH1P02810 166 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 CHRNA7P36544 502 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 RPL27AP46776 148 aaKnown RBP10.11□□□□□ -0.79
CCDC42-202ENST00000539522 CAV2P51636 162 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 MFAP2P55001 183 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 C3orf56Q8N813 242 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 OR5T1Q8NG75 326 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 OR5B3Q8NH48 314 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 DTD1Q8TEA8 209 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 COMMD5Q9GZQ3 224 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
CCDC42-202ENST00000539522 FBXO24O75426 580 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 REG1AP05451 166 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 CRYGCP07315 174 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 IAPPP10997 89 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 ATP5IP56385 69 aaPredicted RBP10.1□□□□□ -0.79
CCDC42-202ENST00000539522 FOXE3Q13461 319 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 SPINK9Q5DT21 86 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 ABHD5Q8WTS1 349 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 ARPC5LQ9BPX5 153 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 SLA2Q9H6Q3 261 aa10.1□□□□□ -0.79
CCDC42-202ENST00000539522 BCL2L11O43521 198 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 CTRB1P17538 263 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 BAXQ07812 192 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 CTRB2Q6GPI1 263 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 SLC51BQ86UW2 128 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
CCDC42-202ENST00000539522 HEYLQ9NQ87 328 aaPredicted RBP10.09□□□□□ -0.79
CCDC42-202ENST00000539522 STRAPQ9Y3F4 350 aaKnown RBP10.09□□□□□ -0.79
CCDC42-202ENST00000539522 U3KQ87 197 aa10.09□□□□□ -0.79
CCDC42-202ENST00000539522 TRBV9A0A0B4J1U6 114 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 INS-IGF2F8WCM5 200 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 SCAF4O95104 1147 aaKnown RBP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 BRI3O95415 125 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 ELANEP08246 267 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 SULT1A1P50225 295 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 RAB9AP51151 201 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 EIF5AP63241 154 aaKnown RBP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 EWSR1Q01844 656 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 NHLH2Q02577 135 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 TMEM267Q0VDI3 215 aaPredicted RBP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 TEX38Q6PEX7 206 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 STX12Q86Y82 276 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 MRPL41Q8IXM3 137 aaKnown RBP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF491Q8N8L2 437 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 TMEM68Q96MH6 324 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 MS4A10Q96PG2 267 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 SRSF8Q9BRL6 282 aaKnown RBP10.08□□□□□ -0.8
CCDC42-202ENST00000539522 GNB4Q9HAV0 340 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 PLEKHA3Q9HB20 300 aa10.08□□□□□ -0.8
CCDC42-202ENST00000539522 IGSF23A1L1A6 192 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 TSPAN15O95858 294 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 HOXA1P49639 335 aaPredicted RBP10.07□□□□□ -0.8
CCDC42-202ENST00000539522 SLC35B1P78383 322 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
CCDC42-202ENST00000539522 TMEM14EPQ6UXP3 125 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 ETV3LQ6ZN32 361 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 TMEM170AQ8WVE7 144 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
CCDC42-202ENST00000539522 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 BORCS7-ASMTA0A0B4J1R7 106 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 TCRBV4S1A1TA0A5B7 111 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 JTBO76095 146 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 CST7O76096 145 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 IFNA10P01566 189 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 PF4V1P10720 104 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 RAB11AP62491 216 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 HBG1P69891 147 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 HBG2P69892 147 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 IFITM2Q01629 132 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 ATP6V1FQ16864 119 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
CCDC42-202ENST00000539522 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 OR1S2Q8NGQ3 325 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
CCDC42-202ENST00000539522 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
CCDC42-202ENST00000539522 H3BP45 60 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 I3L521 148 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms