RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 HIST1H1BP16401 226 aaKnown RBP12.18□□□□□ -0.46
VAMP1-207ENST00000539047 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
VAMP1-207ENST00000539047 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
VAMP1-207ENST00000539047 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 SH2D7A6NKC9 451 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-207ENST00000539047 FNDC10F2Z333 226 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 FBXO24O75426 580 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 IFNA7P01567 189 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 IGHG2P01859 326 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 AMY1AP04745 511 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 CTRB1P17538 263 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 AKR1C1Q04828 323 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 CTRB2Q6GPI1 263 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-207ENST00000539047 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
VAMP1-207ENST00000539047 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 CLDN34H7C241 214 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 CRYBA1P05813 215 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 CRYGCP07315 174 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-207ENST00000539047 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-207ENST00000539047 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
VAMP1-207ENST00000539047 RAB31Q13636 194 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 RPL7L1Q6DKI1 246 aaKnown RBP12.16□□□□□ -0.46
VAMP1-207ENST00000539047 SLC16A13Q7RTY0 426 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 ST8SIA2Q92186 375 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 ZNF355PQ9NSJ1 428 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
VAMP1-207ENST00000539047 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 PMS2P5A8MQ11 134 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 INAFM1C9JVW0 142 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 MPDU1O75352 247 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 IGF1P05019 195 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 FAM157CP0CG43 387 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 CD69Q07108 199 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-207ENST00000539047 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-207ENST00000539047 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-207ENST00000539047 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-207ENST00000539047 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
VAMP1-207ENST00000539047 NSD1Q96L73 2696 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-207ENST00000539047 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 FGF7P21781 194 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 BLCAPP62952 87 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 SLC35B1P78383 322 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
VAMP1-207ENST00000539047 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 H3BUA1 57 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-207ENST00000539047 HILS1P60008 231 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 ASPHD1Q5U4P2 390 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 ZNF767PQ75MW2 155 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 OR2T6Q8NHC8 308 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
VAMP1-207ENST00000539047 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
VAMP1-207ENST00000539047 PVRIGQ6DKI7 326 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
VAMP1-207ENST00000539047 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 GINS3Q9BRX5 216 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
VAMP1-207ENST00000539047 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
VAMP1-207ENST00000539047 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 G3V318 75 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 TCF21O43680 179 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 SOX15O60248 233 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 CRLF1O75462 422 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 MT-CO2P00403 227 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 FABP1P07148 127 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 NECAP1Q8NC96 275 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
VAMP1-207ENST00000539047 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms