RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 NUPL2O15504 423 aaKnown RBP8.69□□□□□ -1.02
RTN3-209ENST00000538995 CDS2O95674 445 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 CD7P09564 240 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 ADMP35318 185 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 MFAP4P55083 255 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 DHODHQ02127 395 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 AARDQ4LEZ3 155 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 FAAP20Q6NZ36 180 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 LINC00322Q6ZN03 302 aaPredicted RBP8.69□□□□□ -1.02
RTN3-209ENST00000538995 MCFD2Q8NI22 146 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 CITED4Q96RK1 184 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 RTBDNQ9BSG5 229 aaPredicted RBP8.69□□□□□ -1.02
RTN3-209ENST00000538995 CHRDL1Q9BU40 450 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 C5orf66Q9H5L9 145 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 NAA60Q9H7X0 242 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 CEPT1Q9Y6K0 416 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 IGHV3-21A0A0B4J1V1 117 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 IGHV3-35A0A0C4DH35 117 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 TEX13DA0A0J9YY54 714 aaPredicted RBP8.68□□□□□ -1.02
RTN3-209ENST00000538995 FABP12A6NFH5 140 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 CRYM-AS1A6NIL9 109 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 OR11H12B2RN74 326 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 CORTO00230 105 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 ST8SIA3O43173 380 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 MT-CO2P00403 227 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 IFNA17P01571 189 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 CTSGP08311 255 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 OR5AC1P0C628 307 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 TNFSF8P32971 234 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 SNCAP37840 140 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 IZUMO4Q1ZYL8 232 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 SP6Q3SY56 376 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 PVRIGQ6DKI7 326 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 RBPMS2Q6ZRY4 209 aaKnown RBP8.68□□□□□ -1.02
RTN3-209ENST00000538995 UBAC2Q8NBM4 344 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 OR52B4Q8NGK2 314 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
RTN3-209ENST00000538995 MUC7Q8TAX7 377 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
RTN3-209ENST00000538995 SCGB3A2Q96PL1 93 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
RTN3-209ENST00000538995 CACFD1Q9UGQ2 172 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 SCP2D1Q9UJQ7 156 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
RTN3-209ENST00000538995 TSPAN4O14817 238 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 NPBWR1P48145 328 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 HOXA1P49639 335 aaPredicted RBP8.67□□□□□ -1.02
RTN3-209ENST00000538995 SUB1P53999 127 aaKnown RBP eCLIP8.67□□□□□ -1.02
RTN3-209ENST00000538995 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 OR51S1Q8NGJ8 323 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 OR52E5Q8NH55 327 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 GLYATL2Q8WU03 294 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 IL22RA2Q969J5 263 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 GALNT14Q96FL9 552 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 OR10C1Q96KK4 312 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 ENY2Q9NPA8 101 aa8.67□□□□□ -1.02
RTN3-209ENST00000538995 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 ZNF701M0R085 212 aaPredicted RBP8.66□□□□□ -1.02
RTN3-209ENST00000538995 GNG7O60262 68 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 SCAF4O95104 1147 aaKnown RBP8.66□□□□□ -1.02
RTN3-209ENST00000538995 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
RTN3-209ENST00000538995 AP3S2P59780 193 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 SPCS3P61009 180 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 BSXQ3C1V8 233 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 SPINK9Q5DT21 86 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 LAMTOR1Q6IAA8 161 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 DUSP18Q8NEJ0 188 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 DEDD2Q8WXF8 326 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 C20orf24Q9BUV8 137 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
RTN3-209ENST00000538995 TMEM56-RWDD3S4R434 201 aa8.66□□□□□ -1.02
RTN3-209ENST00000538995 PIGBOS1A0A0B4J2F0 54 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 CCDC160A6NGH7 325 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 SCGB2A1O75556 95 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 RNASE2P10153 161 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 BMI1P35226 326 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 TMEM268Q5VZI3 342 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 SELENOHQ8IZQ5 122 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 LHFPL5Q8TAF8 219 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 PINX1Q96BK5 328 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 ZNF414Q96IQ9 312 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 RBM38Q9H0Z9 239 aaKnown RBP8.65□□□□□ -1.02
RTN3-209ENST00000538995 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 MCUBQ9NWR8 336 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 KCNIP3Q9Y2W7 256 aa8.65□□□□□ -1.02
RTN3-209ENST00000538995 IGHV7-4-1A0A0J9YVY3 117 aa8.64□□□□□ -1.03
RTN3-209ENST00000538995 OR4C46A6NHA9 309 aa8.64□□□□□ -1.03
RTN3-209ENST00000538995 S100A5P33763 92 aa8.64□□□□□ -1.03
RTN3-209ENST00000538995 ETV6P41212 452 aa8.64□□□□□ -1.03
RTN3-209ENST00000538995 HTR2BP41595 481 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms