RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 OR2K2Q8NGT1 345 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 TMEM170AQ8WVE7 144 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
CD9-208ENST00000538834 TXN2Q99757 166 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 B9D2Q9BPU9 175 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 ZC4H2Q9NQZ6 224 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 PEMTQ9UBM1 199 aa10.38□□□□□ -0.75
CD9-208ENST00000538834 SFT2D2O95562 160 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 SLC25A6P12236 298 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 EDN2P20800 178 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 CCR6P51684 374 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 DEFB114Q30KQ6 69 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 ANKRD55Q3KP44 614 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 ZNF57Q68EA5 555 aaPredicted RBP10.37□□□□□ -0.75
CD9-208ENST00000538834 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 LGI3Q8N145 548 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 C21orf62Q9NYP8 219 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 CACNG5Q9UF02 275 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 CACFD1Q9UGQ2 172 aa10.37□□□□□ -0.75
CD9-208ENST00000538834 IZUMO1RA6ND01 250 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 ZNF785A8K8V0 405 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 A8MZ25 164 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 CBLN1P23435 193 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 GPR183P32249 361 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 SRPXP78539 464 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 PPP1R1AQ13522 171 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 DCTN2Q13561 401 aaKnown RBP10.36□□□□□ -0.75
CD9-208ENST00000538834 SPINK9Q5DT21 86 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 HAPLN4Q86UW8 402 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 FNDC4Q9H6D8 234 aaPredicted RBP10.36□□□□□ -0.75
CD9-208ENST00000538834 TENM3Q9P273 2699 aa10.36□□□□□ -0.75
CD9-208ENST00000538834 A0A1B0GU03 582 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 NDUFA4O00483 81 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 MT-CO2P00403 227 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 IFNA17P01571 189 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 SULT1A3P0DMM9 295 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 SULT1A4P0DMN0 295 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 FOLR2P14207 255 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 C2orf83Q53S99 150 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 TRIQKQ629K1 86 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 PLET1Q6UQ28 207 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 CENPSQ8N2Z9 138 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 TMEM190Q8WZ59 177 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 CCDC32Q9BV29 185 aa10.35□□□□□ -0.75
CD9-208ENST00000538834 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
CD9-208ENST00000538834 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 K7EMT4 169 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 ANXA3P12429 323 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 MFAP4P55083 255 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 SMCO1Q147U7 214 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 OR10C1Q96KK4 312 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 C19orf73Q9NVV2 129 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 GAR1Q9NY12 217 aaKnown RBP10.34□□□□□ -0.75
CD9-208ENST00000538834 PTTG2Q9NZH5 202 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 MRPL36Q9P0J6 103 aaKnown RBP10.34□□□□□ -0.75
CD9-208ENST00000538834 FLVCR2Q9UPI3 526 aa10.34□□□□□ -0.75
CD9-208ENST00000538834 STAB2Q8WWQ8 2551 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 IGHV3-21A0A0B4J1V1 117 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 CORTO00230 105 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 TMEM50AO95807 157 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 HTR2BP41595 481 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 MLANAQ16655 118 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 CD300EQ496F6 205 aaPredicted RBP10.33□□□□□ -0.76
CD9-208ENST00000538834 TM4SF20Q53R12 229 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 MARC2Q969Z3 335 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 MISP3Q96FF7 219 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 PDCD10Q9BUL8 212 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 BATF3Q9NR55 127 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
CD9-208ENST00000538834 MLXQ9UH92 298 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
CD9-208ENST00000538834 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 LYRM1O43325 122 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 SNCAP37840 140 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
CD9-208ENST00000538834 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 C11orf87Q6NUJ2 197 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 OR4X1Q8NH49 305 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
CD9-208ENST00000538834 S100ZQ8WXG8 99 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 CACNG8Q8WXS5 425 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
CD9-208ENST00000538834 C15orf62A8K5M9 175 aa10.31□□□□□ -0.76
CD9-208ENST00000538834 CENPXA8MT69 81 aa10.31□□□□□ -0.76
CD9-208ENST00000538834 OR4E1P0C645 316 aa10.31□□□□□ -0.76
CD9-208ENST00000538834 HOXA1P49639 335 aaPredicted RBP10.31□□□□□ -0.76
CD9-208ENST00000538834 ATP5IP56385 69 aaPredicted RBP10.31□□□□□ -0.76
CD9-208ENST00000538834 DHRS2Q13268 280 aa10.31□□□□□ -0.76
CD9-208ENST00000538834 LINC00322Q6ZN03 302 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms