RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 KCNRGQ8N5I3 272 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 FAM110DQ8TAY7 271 aaPredicted RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 PINX1Q96BK5 328 aaKnown RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 NOL4LQ96MY1 436 aaPredicted RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 ARPC5LQ9BPX5 153 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 SMCO3A2RU48 225 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 AP4M1O00189 453 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 BCL2L11O43521 198 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 TCF21O43680 179 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 FBXO24O75426 580 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
CD4-208ENST00000538827 PRH1P02810 166 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
CD4-208ENST00000538827 CTRB1P17538 263 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 DEFA5Q01523 94 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 ARL16Q0P5N6 197 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 LAMTOR1Q6IAA8 161 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 SLC25A24Q6NUK1 477 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 ZNF114Q8NC26 417 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 OR5C1Q8NGR4 320 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
CD4-208ENST00000538827 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 CLDN34H7C241 214 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 CYB5BO43169 146 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 C4BPBP20851 252 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 S100A11P31949 105 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 OPRK1P41145 380 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 OPCMLQ14982 345 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
CD4-208ENST00000538827 TAF15Q92804 592 aaKnown RBP eCLIP11.11□□□□□ -0.63
CD4-208ENST00000538827 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 CORTO00230 105 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
CD4-208ENST00000538827 MFAP2P55001 183 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 STPG2Q8N412 459 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 ATP5SQ99766 215 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 TMEM147Q9BVK8 224 aa11.1□□□□□ -0.63
CD4-208ENST00000538827 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
CD4-208ENST00000538827 BORCS7-ASMTA0A0B4J1R7 106 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 PMS2P5A8MQ11 134 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 DFFBO76075 338 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 IGF1P05019 195 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 CRYGCP07315 174 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
CD4-208ENST00000538827 DLK1P80370 383 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
CD4-208ENST00000538827 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
CD4-208ENST00000538827 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
CD4-208ENST00000538827 RPS10-NUDT3A0A1W2PQS6 291 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 OR2J3O76001 311 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 MT-CO2P00403 227 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 CD69Q07108 199 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
CD4-208ENST00000538827 AKIRIN2Q53H80 203 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
CD4-208ENST00000538827 Q6ZSV7 163 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 MS4A10Q96PG2 267 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 UQCC1Q9NVA1 299 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 DMRT1Q9Y5R6 373 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 TGP01266 2768 aa11.08□□□□□ -0.64
CD4-208ENST00000538827 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 PRSS46E5RG02 174 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 TAAR5O14804 337 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 IFNA5P01569 189 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 PF4V1P10720 104 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 HIST1H1BP16401 226 aaKnown RBP11.07□□□□□ -0.64
CD4-208ENST00000538827 FGF7P21781 194 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 ZNF266Q14584 549 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 ATP6V1FQ16864 119 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 ACY3Q96HD9 319 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 S4R3C0 116 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 PKD1L1Q8TDX9 2849 aa11.07□□□□□ -0.64
CD4-208ENST00000538827 PSMB11A5LHX3 300 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 SOX15O60248 233 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 TRGV3P03979 118 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 TPPP2P59282 170 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 RPL15P61313 204 aaKnown RBP11.06□□□□□ -0.64
CD4-208ENST00000538827 SLC35B1P78383 322 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 RHOGP84095 191 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 MLANAQ16655 118 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms