RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 HBZP02008 142 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 CRYBB3P26998 211 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-209ENST00000538654 PPOXP50336 477 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 TCL1AP56279 114 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 ERVK-16P61578 105 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 FXYD3Q14802 87 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 TNXAQ16473 311 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 SLC25A45Q8N413 288 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 OR52L2PQ8NGH6 319 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 SSMEM1Q8WWF3 244 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 OR2V2Q96R30 315 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 SERTAD4Q9NUC0 356 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 OCIAD1Q9NX40 245 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 DIDO1Q9BTC0 2240 aaKnown RBP7.44□□□□□ -1.22
SNHG1-209ENST00000538654 TRANK1O15050 2925 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 C2orf70A6NJV1 201 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 FNDC10F2Z333 226 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 COX6A1P12074 109 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 OTX2P32243 289 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 SLC35B1P78383 322 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 EBLN2Q6P2I7 272 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 TECRQ9NZ01 308 aaKnown RBP7.44□□□□□ -1.22
SNHG1-209ENST00000538654 WASHC3Q9Y3C0 194 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 ESPL1Q14674 2120 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 TRGV8A0A0C4DH27 118 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 CRXO43186 299 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-209ENST00000538654 GFRA3O60609 400 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 OR2J3O76001 311 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 HAND1O96004 215 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 PSG1P11464 419 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 TAS2R45P59539 299 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 PSG5Q15238 335 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 MPV17L2Q567V2 206 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 FAM71F2Q6NXP2 309 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 VWA1Q6PCB0 445 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 SLC25A34Q6PIV7 304 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 SPACA3Q8IXA5 215 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 C19orf24Q9BVV8 132 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 PLEKHA3Q9HB20 300 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 CEP192Q8TEP8 1941 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 LINC00473A8K010 186 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 CD5LO43866 347 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 FOXH1O75593 365 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 HLA-DRB1P01911 266 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 MGST1P10620 155 aaKnown RBP7.43□□□□□ -1.22
SNHG1-209ENST00000538654 ARF6P62330 175 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 SPATA31B1PQ5VZV4 182 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 LRRC75A-AS1Q8N1F1 130 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 TNFRSF19Q9NS68 423 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
SNHG1-209ENST00000538654 ASCC3Q8N3C0 2202 aaKnown RBP7.43□□□□□ -1.22
SNHG1-209ENST00000538654 A0A1W2PRE2 83 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 OR4C46A6NHA9 309 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 NUDT3O95989 172 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 PRR20EP86478 221 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 PRR20CP86479 221 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 PRR20DP86480 221 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 PRR20BP86481 221 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 PRR20AP86496 221 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 C9orf135Q5VTT2 229 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 CDX2Q99626 313 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-209ENST00000538654 USF3Q68DE3 2245 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 IGHV5-10-1A0A0J9YXX1 117 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 FCGR3BO75015 233 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 DUTP33316 252 aaKnown RBP7.42□□□□□ -1.22
SNHG1-209ENST00000538654 ZXDAP98168 799 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 OR1L4Q8NGR5 311 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 GRAMD2BQ96HH9 432 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 IGF2BP2-AS1Q96M15 143 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 CNTRLQ7Z7A1 2325 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 TIMM8AO60220 97 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-209ENST00000538654 IGLV2-8P01709 118 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 ADH4P08319 380 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 SRFP11831 508 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 KIR2DS2P43631 304 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 MFAP2P55001 183 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 GABRA6Q16445 453 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 MIR17HGQ75NE6 70 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
SNHG1-209ENST00000538654 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
SNHG1-209ENST00000538654 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 GDF1P27539 372 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 GPR12P47775 334 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 ABHD12Q8N2K0 398 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 MS4A6AQ9H2W1 248 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 GCM1Q9NP62 436 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 ENY2Q9NPA8 101 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 PSG11Q9UQ72 335 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 NCKAP5O14513 1909 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 A0A0G2JMM0 328 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms