RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 MOB3AQ96BX8 217 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 ADTRPQ96IZ2 230 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 ZNF48Q96MX3 618 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 DUX5Q96PT3 197 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 HSD17B10Q99714 261 aaKnown RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 AGMATQ9BSE5 352 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 ZNF2Q9BSG1 426 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 RNF126Q9BV68 326 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 PBDC1Q9BVG4 233 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 MRPL20Q9BYC9 149 aaKnown RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 C5orf66Q9H5L9 145 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 FAM212BQ9NTI7 297 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 OR5AC2Q9NZP5 309 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 METTL1Q9UBP6 276 aaKnown RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 VPREB3Q9UKI3 123 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 TNFRSF18Q9Y5U5 241 aa3.44□□□□□ -1.86
SNHG1-208ENST00000538266 SOX21Q9Y651 276 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 SONP18583 2426 aaKnown RBP3.44□□□□□ -1.86
SNHG1-208ENST00000538266 HIVEP1P15822 2718 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGHV3-72A0A0B4J1Y9 119 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV1D-13A0A0B4J2D9 117 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGLV5-39A0A0G2JS06 123 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 C5orf52A6NGY3 159 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LINC00587B1AMM8 73 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 M0QZK8 103 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 M0R036 132 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 WRBO00258 174 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TNFSF12O43508 249 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 GATCO43716 136 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 DEDDO75618 318 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 ADAP1O75689 374 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 VENTXO95231 258 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 MOSP00540 346 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV1D-33P01593 117 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV1-33P01594 117 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CTSDP07339 412 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 SNRNP70P08621 437 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV1-13P0DP09 117 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TMEM11P17152 192 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CD24P25063 80 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 S100PP25815 95 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CD1BP29016 333 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 RPL12P30050 165 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 THBS3P49746 956 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 PPT1P50897 306 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 RAB5CP51148 216 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 RIPPLY3P57055 190 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 SNRPEP62304 92 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 SUPT4H1P63272 117 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CATR1Q13166 79 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 DIAPH2-AS1Q14236 149 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 HNF4GQ14541 408 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 PLGLAQ15195 96 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 MMDQ15546 238 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TWIST1Q15672 202 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 MSMO1Q15800 293 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LY6EQ16553 131 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 IAH1Q2TAA2 248 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 PHLDA2Q53GA4 152 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 AKIRIN2Q53H80 203 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LDLRAD2Q5SZI1 272 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 AADACL3Q5VUY0 350 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TMEM219Q86XT9 240 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 DYNAPQ8N1N2 210 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LINC00469Q8N7U9 141 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CCDC71LQ8N9Z2 235 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 UBAC2Q8NBM4 344 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LFNGQ8NES3 379 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 OR4C13Q8NGP0 309 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 OR2T10Q8NGZ9 312 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 OR51H1Q8NH63 302 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CD300LFQ8TDQ1 290 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TCTEX1D2Q8WW35 142 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 ST6GALNAC6Q969X2 333 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 NPFFR1Q9GZQ6 430 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TOLLIPQ9H0E2 274 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 ARV1Q9H2C2 271 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TUBA4BQ9H853 241 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 RPS10P5Q9NQ39 176 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CCL28Q9NRJ3 127 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 SLC35D1Q9NTN3 355 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 C1RLQ9NZP8 487 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 GSKIPQ9P0R6 139 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 KIAA1456Q9P272 454 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 CACFD1Q9UGQ2 172 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 GPR132Q9UNW8 380 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 WASHC3Q9Y3C0 194 aa3.43□□□□□ -1.86
SNHG1-208ENST00000538266 FN1P02751 2386 aaKnown RBP3.43□□□□□ -1.86
SNHG1-208ENST00000538266 A0A1B0GW64 132 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CRYM-AS1A6NIL9 109 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 NCBP2LA6PVI3 153 aaKnown RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 UMAD1C9J7I0 102 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 E5RGE8 158 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 H0YJW9 148 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 AGPAT2O15120 278 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms