RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SS18L1O75177 396 aaPredicted RBP4.83□□□□□ -1.64
CSMD1-215ENST00000537824 ADRA2AP08913 450 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 CD27P26842 260 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 LGALS7P47929 136 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF818PQ6ZRF7 136 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 PPDPFLQ8WWR9 84 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 EPDR1Q9UM22 224 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 SOX8P57073 446 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 RTBDNQ9BSG5 229 aaPredicted RBP4.83□□□□□ -1.64
CSMD1-215ENST00000537824 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
CSMD1-215ENST00000537824 IGKV3OR2-268A0A0C4DH90 116 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 UBE2L6O14933 153 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ZFP36L2P47974 494 aaKnown RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 WFDC12Q8WWY7 111 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 NPIPB6E9PJ23 425 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CCL17Q92583 94 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ZDHHC16Q969W1 377 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 C19orf48Q6RUI8 117 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 COQ2Q96H96 371 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ADAMTS7Q9UKP4 1686 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 IGKV3D-15A0A087WSY6 115 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 IGKV3-15P01624 115 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 KCNMB1Q16558 191 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 KIR3DL3Q8N743 410 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 C2orf82Q6UX34 121 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 TMPRSS2O15393 492 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 PRDX2P32119 198 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM238C9JI98 176 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ATXN8Q156A1 80 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 LEAP2Q969E1 77 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 SERGEFQ9UGK8 458 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 A0A1W2PRE2 83 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CXCL12P48061 93 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 GNG5P63218 68 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 FAM90A2PQ658T7 463 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CHCHD1Q96BP2 118 aaKnown RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 MRPL32Q9BYC8 188 aaKnown RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 AKAP13Q12802 2813 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 TRGV5A0A0B4J1U4 118 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 FOXI3A8MTJ6 420 aaPredicted RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 F2RL2O00254 374 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 RPL27AP46776 148 aaKnown RBP4.82□□□□□ -1.64
CSMD1-215ENST00000537824 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 SLC25A2Q9BXI2 301 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM144Q7Z5S9 345 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 GNB1LQ9BYB4 327 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CLEC1BQ9P126 229 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CPAMD8Q8IZJ3 1885 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 MDP1Q86V88 176 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF525Q8N782 197 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF645Q8N7E2 425 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 C19orf24Q9BVV8 132 aa4.82□□□□□ -1.64
CSMD1-215ENST00000537824 CD5LO43866 347 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 RND2P52198 227 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 SLC25A53Q5H9E4 307 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 TRBV7-9A0A0J9YWB2 115 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 GUSBP1Q15486 140 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 LCNL1Q6ZST4 164 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 PRSS53Q2L4Q9 553 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 PRR31Q5SQ13 230 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 FBXW9Q5XUX1 488 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 LIMS2Q7Z4I7 341 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 NKX2-8O15522 239 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 ZG16O60844 167 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 TNS1Q9HBL0 1735 aaKnown RBP4.81□□□□□ -1.64
CSMD1-215ENST00000537824 TRBV24-1A0A075B6N3 115 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 C9orf118A6NHY6 69 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 LMO7DNF2Z398 122 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 M0R381 172 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 NAPSAO96009 420 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 C18orf12Q96KH6 178 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 MS4A5Q9H3V2 200 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 LHFPL6Q9Y693 200 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF815PA8K554 130 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 MOSP00540 346 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 CCL7P80098 99 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 CD300EQ496F6 205 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-215ENST00000537824 OCC1Q8TAD7 63 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 HES7Q9BYE0 225 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 H3BRM9 83 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 IGFBP2P18065 325 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 GTSCR1Q86UQ5 136 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 GGTLC3B5MD39 225 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 WDR82Q6UXN9 313 aa4.81□□□□□ -1.64
CSMD1-215ENST00000537824 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 LILRA5A6NI73 299 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 ZNHIT1O43257 154 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 HBDP02042 147 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 OR10J3Q5JRS4 329 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 INSIG2Q9Y5U4 225 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 COL16A1Q07092 1604 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 B5MCH6 92 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 IFITM1P13164 125 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms