RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 H2BFWTQ7Z2G1 175 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 CADM3Q8N126 398 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 OR6F1Q8NGZ6 308 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 S100A16Q96FQ6 103 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 MS4A6AQ9H2W1 248 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 RAB26Q9ULW5 256 aa9.49□□□□□ -0.89
TNFRSF1A-207ENST00000535958 SPARTQ8N0X7 666 aa9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DUSP18Q8NEJ0 188 aa9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ST8SIA2Q92186 375 aa9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 NARS2Q96I59 477 aaKnown RBP9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 HRH4Q9H3N8 390 aa9.48□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 A0A1W2PS18 150 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 I3L2K1 104 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TMEM127O75204 238 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 MIFP14174 115 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 SNCAP37840 140 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TSPAN5P62079 268 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PRCDQ00LT1 54 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PHLDA2Q53GA4 152 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 TMEM69Q5SWH9 247 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 DHRS11Q6UWP2 260 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ZNF600Q6ZNG1 722 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 LINC00336Q6ZUF6 198 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 Q9H521 79 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
TNFRSF1A-207ENST00000535958 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SPP1P10451 314 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HLA-DMBP28068 263 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 UBE2NLQ5JXB2 153 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TOMM20LQ6UXN7 152 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 CROCCP3Q8IVE0 287 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SLC35G3Q8N808 338 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RNF167Q9H6Y7 350 aa9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 PUS1Q9Y606 427 aaKnown RBP eCLIP9.46□□□□□ -0.9
TNFRSF1A-207ENST00000535958 IGHV4-4A0A075B6R2 117 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 DBX1A6NMT0 343 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NPPCP23582 126 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TBC1D26Q86UD7 250 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 Q8NAQ8 132 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 MRGPRFQ96AM1 343 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 METTL26Q96S19 204 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 VSIRQ9H7M9 311 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 FAM212BQ9NTI7 297 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
TNFRSF1A-207ENST00000535958 CORTO00230 105 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HLA-DMAP28067 261 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 PRSS3P35030 304 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HRH1P35367 487 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HOXA1P49639 335 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TAS2R20P59543 309 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HSPE1P61604 102 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SPINK9Q5DT21 86 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 Q6ZTC4 211 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SAMD12Q8N8I0 201 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ENY2Q9NPA8 101 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ATG12O94817 140 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 IFNA17P01571 189 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 AKR1C2P52895 323 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 NEDD8Q15843 81 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 PVRIGQ6DKI7 326 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 FAM24BQ8N5W8 94 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SEC22AQ96IW7 307 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 YTHDF1Q9BYJ9 559 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
TNFRSF1A-207ENST00000535958 P0DMU3 169 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 OPRK1P41145 380 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 P2RY1P47900 373 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 KCTD21Q4G0X4 260 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ACTL10Q5JWF8 245 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
TNFRSF1A-207ENST00000535958 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 HELTA6NFD8 242 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
TNFRSF1A-207ENST00000535958 ZNF705EA8MWA4 302 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms