RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IGKV1-33P01594 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 CELA2BP08218 269 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 FOXA3P55318 350 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 IZUMO4Q1ZYL8 232 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 GAGE13Q4V321 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 MIR17HGQ75NE6 70 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 OR11H6Q8NGC7 330 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 Q8TCH9 128 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 CDK5RAP2Q96SN8 1893 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 RBBP6Q7Z6E9 1792 aaKnown RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 A8MWV9 139 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 C2CD4DB7Z1M9 353 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 CSN3P07498 182 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 IGFBP2P18065 325 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 Q6ZS52 159 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 STPG4Q8N801 248 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 LOC285556D6RIA3 1793 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 SCN10AQ9Y5Y9 1956 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 LOC101059948A0A1B0GTJ6 334 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 NXPH3O95157 252 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 RBP4P02753 201 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 PDCD1Q15116 288 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 ZNF788Q6ZQV5 615 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 Q86TA4 180 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 ABHD12Q8N2K0 398 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 SRSF12Q8WXF0 261 aaKnown RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 MBD6Q96DN6 1003 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 NPFFR1Q9GZQ6 430 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 YAE1D1Q9NRH1 226 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 SIT1Q9Y3P8 196 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 FAM186AA6NE01 2351 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 TAF1P21675 1872 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 SLC25A16P16260 332 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 CEBPDP49716 269 aaPredicted RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 SRXN1Q9BYN0 137 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 TMEM74BQ9NUR3 256 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 PLA2G2EQ9NZK7 142 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 TNS1Q9HBL0 1735 aaKnown RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 C9orf172C9J069 976 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 K7EM74 188 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 IGHG3P01860 377 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 WNT5AP41221 380 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 HES1Q14469 280 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 TNXAQ16473 311 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 KIAA1644Q3SXP7 199 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 MBNL2Q5VZF2 373 aaKnown RBP3.34□□□□□ -1.87
SOX6-217ENST00000533870 VGLL1Q99990 258 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 PSG8Q9UQ74 426 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 KNL1Q8NG31 2342 aa3.34□□□□□ -1.87
SOX6-217ENST00000533870 A0A0G2JRQ6 117 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 A0A1W2PR80 420 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 NDUFB8O95169 186 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 IGHV3-9P01782 118 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 NPSP0C0P6 89 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 IGLL1P15814 213 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 ORM2P19652 201 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 CTRLP40313 264 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 LYZP61626 148 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 FER1L6-AS1Q8NA97 138 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 RAB37Q96AX2 223 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 KIR2DL4Q99706 377 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 IGHV1-69DA0A0B4J2H0 117 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 NPIPB6E9PJ23 425 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 NTN3O00634 580 aaPredicted RBP3.34□□□□□ -1.88
SOX6-217ENST00000533870 ATXN7O15265 892 aaPredicted RBP3.34□□□□□ -1.88
SOX6-217ENST00000533870 SPINK4O60575 86 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 CRYGCP07315 174 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 B3GALT5-AS1P59052 145 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 PSG7Q13046 419 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 GUSBP11Q6P575 273 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 ZCCHC24Q8N2G6 241 aaKnown RBP3.34□□□□□ -1.88
SOX6-217ENST00000533870 SLC25A45Q8N413 288 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 THAP8Q8NA92 274 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 TPPP3Q9BW30 176 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 MRPL16Q9NX20 251 aaKnown RBP3.34□□□□□ -1.88
SOX6-217ENST00000533870 RFNGQ9Y644 331 aa3.34□□□□□ -1.88
SOX6-217ENST00000533870 LHX2P50458 406 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 Q1RN00 199 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 LINC00696Q6ZRV3 163 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 C9orf139Q6ZV77 190 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 BHLHA15Q7RTS1 189 aaPredicted RBP3.33□□□□□ -1.88
SOX6-217ENST00000533870 TRBV7-9A0A0J9YWB2 115 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 LINC01619G3V211 115 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 RNASE2P10153 161 aaKnown RBP3.33□□□□□ -1.88
SOX6-217ENST00000533870 ZNF83P51522 516 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 SRSF2Q01130 221 aaKnown RBP3.33□□□□□ -1.88
SOX6-217ENST00000533870 RSPO1Q2MKA7 263 aaPredicted RBP3.33□□□□□ -1.88
SOX6-217ENST00000533870 SAMD5Q5TGI4 173 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 FAM104BQ5XKR9 115 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 MOGAT3Q86VF5 341 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 DLX4Q92988 240 aaPredicted RBP3.33□□□□□ -1.88
SOX6-217ENST00000533870 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 ZNF747Q9BV97 191 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 IGHV3-43A0A0B4J1X8 118 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 PSMB11A5LHX3 300 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 LRRC37A2A6NM11 1700 aa3.33□□□□□ -1.88
SOX6-217ENST00000533870 PMS2P5A8MQ11 134 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms