RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 OR2A7Q96R45 310 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 SPIN2AQ99865 258 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 SPIN2BQ9BPZ2 258 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 ZNF430Q9H8G1 570 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 KBTBD11O94819 623 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 MAS1LP35410 378 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 H2BFSP57053 126 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 FAM219AQ8IW50 185 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 TMEM167AQ8TBQ9 72 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 FAM110AQ9BQ89 295 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 TMEM140Q9NV12 185 aa11.97□□□□□ -0.49
CHMP4A-207ENST00000533523 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 MSGN1A6NI15 193 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 KLF5Q13887 457 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 OR4A47Q6IF82 309 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 ZBTB8BQ8NAP8 495 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 OR4A5Q8NH83 315 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 C2orf50Q96LR7 162 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
CHMP4A-207ENST00000533523 SLC25A6P12236 298 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 THOC7Q6I9Y2 204 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 Q6ZRM9 215 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 WDR89Q96FK6 387 aaPredicted RBP11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 PDCD10Q9BUL8 212 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 PLEKHA3Q9HB20 300 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 BET1LQ9NYM9 111 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
CHMP4A-207ENST00000533523 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 CCNKO75909 580 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 GIPP09681 153 aaPredicted RBP11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 RPL8P62917 257 aaKnown RBP11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 RPEL1Q2QD12 228 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 GSKIPQ9P0R6 139 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 NSG2Q9Y328 171 aa11.94□□□□□ -0.5
CHMP4A-207ENST00000533523 UPK2O00526 184 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 SNAPC5O75971 98 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 APELAP0DMC3 54 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 OR2B8PP59922 312 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 OR1S1Q8NH92 325 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
CHMP4A-207ENST00000533523 FAM223BA6NKX1 122 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 PITX3O75364 302 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 CSN3P07498 182 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 FGF2P09038 288 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 CD81P60033 236 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 RAP2BP61225 183 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 CYCSP99999 105 aaKnown RBP11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 FAM223AQ8IWN6 122 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 TTC9CQ8N5M4 171 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 IL17DQ8TAD2 202 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 ASB13Q8WXK3 278 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 NMES1Q9C002 83 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
CHMP4A-207ENST00000533523 C15orf61A6NNL5 157 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 PFDN1O60925 122 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 RBMXL2O75526 392 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 CD300CQ08708 224 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 IL15RAQ13261 267 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 FAM209BQ5JX69 171 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 FYTTD1Q96QD9 318 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 QTRT1Q9BXR0 403 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
CHMP4A-207ENST00000533523 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 ST8SIA3O43173 380 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 NXPH3O95157 252 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 SCGB1D2O95969 90 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 RHOGP84095 191 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 EXOSC2Q13868 293 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms