RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SPANXN5Q5MJ07 72 aa13.55□□□□□ -0.24
NXF1-216ENST00000533499 TRBV9A0A0B4J1U6 114 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 ADARB2-AS1A8MUL3 147 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 IFNA4P05014 189 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
NXF1-216ENST00000533499 UBAC2Q8NBM4 344 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 ZNF114Q8NC26 417 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 MYOZ3Q8TDC0 251 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 C4orf3Q8WVX3 66 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 DPF1Q92782 380 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 EEF1AKMT3Q96AZ1 226 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 PSENENQ9NZ42 101 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 U3KQ87 197 aa13.54□□□□□ -0.24
NXF1-216ENST00000533499 MFSD2BA6NFX1 497 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 K7EPK0 472 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 BRI3O95415 125 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 MT-CO2P00403 227 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 PF4P02776 101 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 LGALS1P09382 135 aaKnown RBP13.53□□□□□ -0.24
NXF1-216ENST00000533499 OR8U8P0C7N1 319 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 CXCL3P19876 107 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 OPRK1P41145 380 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 BCAP31P51572 246 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 H2BFSP57053 126 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
NXF1-216ENST00000533499 RPP30P78346 268 aaKnown RBP13.53□□□□□ -0.24
NXF1-216ENST00000533499 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
NXF1-216ENST00000533499 RAB32Q13637 225 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 NOXA1Q86UR1 476 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 WDR89Q96FK6 387 aaPredicted RBP13.53□□□□□ -0.24
NXF1-216ENST00000533499 OR4F4Q96R69 305 aa13.53□□□□□ -0.24
NXF1-216ENST00000533499 WNK1Q9H4A3 2382 aa13.52□□□□□ -0.24
NXF1-216ENST00000533499 PVALBP20472 110 aaPredicted RBP13.52□□□□□ -0.25
NXF1-216ENST00000533499 RAB11AP62491 216 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 Q56UQ5 140 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 CLEC19AQ6UXS0 136 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 OR11H7Q8NGC8 314 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 OR1N2Q8NGR9 330 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 RAB40CQ96S21 281 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 NMES1Q9C002 83 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 ZC4H2Q9NQZ6 224 aa13.52□□□□□ -0.25
NXF1-216ENST00000533499 STRAPQ9Y3F4 350 aaKnown RBP13.52□□□□□ -0.25
NXF1-216ENST00000533499 hCG_2014768A0A024R1R8 64 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 CORTO00230 105 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 TSPAN15O95858 294 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 RLN2P04090 185 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 ACSM6Q6P461 480 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 OR11H1Q8NG94 326 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 SCARB1Q8WTV0 552 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 OR4C12Q96R67 309 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 C21orf62Q9NYP8 219 aa13.51□□□□□ -0.25
NXF1-216ENST00000533499 IGHV4OR15-8A0A075B7B6 117 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 A0A087WW49 117 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 K7EIM0 57 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 CCL24O00175 119 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 LY86O95711 162 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 GPR183P32249 361 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 CAV2P51636 162 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 MLANAQ16655 118 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 ZNF343Q6P1L6 599 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 ETV3LQ6ZN32 361 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 RAX2Q96IS3 184 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 SMIM8Q96KF7 97 aa13.5□□□□□ -0.25
NXF1-216ENST00000533499 PEF1Q9UBV8 284 aaKnown RBP13.5□□□□□ -0.25
NXF1-216ENST00000533499 RPS10-NUDT3A0A1W2PQS6 291 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 C15orf62A8K5M9 175 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 PPP5D1E7EU14 171 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 I3L2K1 104 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 I3L521 148 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 TMEM50AO95807 157 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 HSPB1P04792 205 aaKnown RBP13.49□□□□□ -0.25
NXF1-216ENST00000533499 CLEC3BP05452 202 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 PPP1R1CQ8WVI7 109 aa13.49□□□□□ -0.25
NXF1-216ENST00000533499 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
NXF1-216ENST00000533499 RANGRFQ9HD47 186 aaPredicted RBP13.49□□□□□ -0.25
NXF1-216ENST00000533499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
NXF1-216ENST00000533499 TRBV7-1A0A0A6YYK4 115 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 OR2T8A6NH00 312 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 LINC01619G3V211 115 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 METTL15P1P0C7V9 234 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 ARL3P36405 182 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 MFAP4P55083 255 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 PAX9P55771 341 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
NXF1-216ENST00000533499 ZNF616Q08AN1 781 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 IL15RAQ13261 267 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 Q6ZNX1 250 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 ZNF502Q8TBZ5 544 aa13.48□□□□□ -0.25
NXF1-216ENST00000533499 RNASEH2CQ8TDP1 164 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms