RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PIGBOS1A0A0B4J2F0 54 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 DUXBA0A1W2PPF3 345 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 F8W735 103 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-209ENST00000532725 LGALS9O00182 355 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 SNCAP37840 140 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 ENY2Q9NPA8 101 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 C21orf62Q9NYP8 219 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 SIGLEC8Q9NYZ4 499 aa15.13■□□□□ 0.01
CPSF1-209ENST00000532725 C9orf170A2RU37 121 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 RNASE2P10153 161 aaKnown RBP15.12■□□□□ 0.01
CPSF1-209ENST00000532725 GPR183P32249 361 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-209ENST00000532725 SMCO1Q147U7 214 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 BSXQ3C1V8 233 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 MRAPQ8TCY5 172 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 MISP3Q96FF7 219 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 ZC4H2Q9NQZ6 224 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 CACFD1Q9UGQ2 172 aa15.12■□□□□ 0.01
CPSF1-209ENST00000532725 A0A1B0GU03 582 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 OR2T8A6NH00 312 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 TGOLN2O43493 480 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 MT-CO2P00403 227 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 IGLV1-51P01701 117 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 SUB1P53999 127 aaKnown RBP eCLIP15.11■□□□□ 0.01
CPSF1-209ENST00000532725 FAM106AQ4KMX7 169 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 PLET1Q6UQ28 207 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 ADAMTSL5Q6ZMM2 481 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 PEMTQ9UBM1 199 aa15.11■□□□□ 0.01
CPSF1-209ENST00000532725 TGP01266 2768 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 PITX3O75364 302 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 OR4E1P0C645 316 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 ANXA7P20073 488 aaKnown RBP15.1■□□□□ 0.01
CPSF1-209ENST00000532725 FCGR2BP31994 310 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-209ENST00000532725 ZNF846Q147U1 533 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 BSCL2Q96G97 398 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-209ENST00000532725 WDR12Q9GZL7 423 aaKnown RBP15.1■□□□□ 0.01
CPSF1-209ENST00000532725 HSPB7Q9UBY9 170 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 ZNF256Q9Y2P7 627 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-209ENST00000532725 TMED3Q9Y3Q3 217 aa15.1■□□□□ 0.01
CPSF1-209ENST00000532725 CEBPZOSA8MTT3 80 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 TCRBP04435 133 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 CTSGP08311 255 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 SLC25A6P12236 298 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 SPNP16150 400 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 ADMP35318 185 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 TNFRSF9Q07011 255 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 DHRS2Q13268 280 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 SPSB3Q6PJ21 355 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 HAPLN4Q86UW8 402 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 PINX1Q96BK5 328 aaKnown RBP15.09■□□□□ 0.01
CPSF1-209ENST00000532725 PRR25Q96S07 402 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 TXN2Q99757 166 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 CHRDL1Q9BU40 450 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 ZNF436Q9C0F3 470 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-209ENST00000532725 HEYLQ9NQ87 328 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-209ENST00000532725 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
CPSF1-209ENST00000532725 NXPH3O95157 252 aa15.08■□□□□ 0
CPSF1-209ENST00000532725 IGHV3-48P01763 117 aa15.08■□□□□ 0
CPSF1-209ENST00000532725 HTR2BP41595 481 aa15.08■□□□□ 0
CPSF1-209ENST00000532725 MFAP4P55083 255 aa15.08■□□□□ 0
CPSF1-209ENST00000532725 LYG2Q86SG7 212 aa15.08■□□□□ 0
CPSF1-209ENST00000532725 IGHV3-35A0A0C4DH35 117 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 ZNF320A2RRD8 509 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 C2orf70A6NJV1 201 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 UPK1BO75841 260 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 HOXB5P09067 269 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 IFITM3Q01628 133 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 MLANAQ16655 118 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 C2orf83Q53S99 150 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 Q56UQ5 140 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 DEFB121Q5J5C9 76 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 GGNBP1Q5YKI7 109 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 UNQ9165/PRO28630Q6UXU0 137 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 UBAC2Q8NBM4 344 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 OR1S1Q8NH92 325 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 TMEM170AQ8WVE7 144 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 ZNF414Q96IQ9 312 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 C20orf85Q9H1P6 137 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 HIPK2Q9H2X6 1198 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 RBKSQ9H477 322 aa15.07■□□□□ 0
CPSF1-209ENST00000532725 GAR1Q9NY12 217 aaKnown RBP15.07■□□□□ 0
CPSF1-209ENST00000532725 LSM4Q9Y4Z0 139 aaKnown RBP15.07■□□□□ 0
CPSF1-209ENST00000532725 A8MWP6 167 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 CORTO00230 105 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 FOLR2P14207 255 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 EDN2P20800 178 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 ASAH1Q13510 395 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 C4orf46Q504U0 113 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 C11orf87Q6NUJ2 197 aa15.06■□□□□ 0
CPSF1-209ENST00000532725 FNDC4Q9H6D8 234 aaPredicted RBP15.06■□□□□ 0
CPSF1-209ENST00000532725 TMEM213A2RRL7 107 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 GP9P14770 177 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 CBLN1P23435 193 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 TM4SF20Q53R12 229 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 DUSP18Q8NEJ0 188 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 COQ8AQ8NI60 647 aa15.05■□□□□ -0
CPSF1-209ENST00000532725 TRAV6A0A075B6T7 132 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 NDUFA4O00483 81 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 ADAP1O75689 374 aa15.04■□□□□ -0
CPSF1-209ENST00000532725 LY86O95711 162 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms