RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	LYZL2	Q7Z4W2	148 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	UBAC2	Q8NBM4	344 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	B9D2	Q9BPU9	175 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	PDCD10	Q9BUL8	212 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	SORL1	Q92673	2214 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	TMEM213	A2RRL7	107 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	NXPH3	O95157	252 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	MT-CO2	P00403	227 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	ADM	P35318	185 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	CD69	Q07108	199 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	CD300E	Q496F6	205 aa	Predicted RBP	13.19	□□□□□ -0.3
CTSB-223	ENST00000532370		Q56UQ5	140 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	C11orf87	Q6NUJ2	197 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	IL22RA2	Q969J5	263 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	PINX1	Q96BK5	328 aa	Known RBP	13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	COL7A1	Q02388	2944 aa		13.19	□□□□□ -0.3
CTSB-223	ENST00000532370	INS-IGF2	F8WCM5	200 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	RNASE2	P10153	161 aa	Known RBP	13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	CBLN1	P23435	193 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	SNCA	P37840	140 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	INPP1	P49441	399 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	SPCS3	P61009	180 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	DCTN2	Q13561	401 aa	Known RBP	13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	DEFB114	Q30KQ6	69 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370		Q8N1Y9	231 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	BSCL2	Q96G97	398 aa	Predicted RBP	13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	CCDC32	Q9BV29	185 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	SMAD5-AS1	Q9Y6J3	95 aa		13.18	□□□□□ -0.3
CTSB-223	ENST00000532370	IGHV3OR16-8	A0A075B7F1	116 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370		A0A0B4J2A0	478 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	CTSG	P08311	255 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	IL7	P13232	177 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	ANKRD55	Q3KP44	614 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	TMEM128	Q5BJH2	165 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	NMS	Q5H8A3	153 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	LGI3	Q8N145	548 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	UXS1	Q8NBZ7	420 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	OR52E5	Q8NH55	327 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	DYNLRB2	Q8TF09	96 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	ZNF414	Q96IQ9	312 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	ASCL2	Q99929	193 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	WDR12	Q9GZL7	423 aa	Known RBP	13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	ENY2	Q9NPA8	101 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	SHPK	Q9UHJ6	478 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370	FLVCR2	Q9UPI3	526 aa		13.17	□□□□□ -0.3
CTSB-223	ENST00000532370		A8MWP6	167 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	ANXA3	P12429	323 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	VAMP1	P23763	118 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	MFAP4	P55083	255 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	PPP1R1A	Q13522	171 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	ZNF846	Q147U1	533 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	MLANA	Q16655	118 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	PVRIG	Q6DKI7	326 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	LCN12	Q6JVE5	192 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	SPSB3	Q6PJ21	355 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	MLX	Q9UH92	298 aa		13.16	□□□□□ -0.3
CTSB-223	ENST00000532370	ZNF785	A8K8V0	405 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	SULT1A3	P0DMM9	295 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	SULT1A4	P0DMN0	295 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	BTC	P35070	178 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	RBMS2	Q15434	407 aa	Known RBP	13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	BSX	Q3C1V8	233 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	CENPS	Q8N2Z9	138 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	TMEM190	Q8WZ59	177 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	ATP6V0B	Q99437	205 aa		13.15	□□□□□ -0.3
CTSB-223	ENST00000532370	NAP1L6	A6NFF2	107 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	CEBPZOS	A8MTT3	80 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	ZNF207	O43670	478 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	NDUFB6	O95139	128 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	SFT2D2	O95562	160 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	SRPX	P78539	464 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	SMCO1	Q147U7	214 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	OR2K2	Q8NGT1	345 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	WDR89	Q96FK6	387 aa	Predicted RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	C20orf24	Q9BUV8	137 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	HEYL	Q9NQ87	328 aa	Predicted RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	TECR	Q9NZ01	308 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	MRPL36	Q9P0J6	103 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	UFC1	Q9Y3C8	167 aa		13.14	□□□□□ -0.31
CTSB-223	ENST00000532370	NDUFA4	O00483	81 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	PLA2G10	O15496	165 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	NUPL2	O15504	423 aa	Known RBP	13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	FRMD6-AS1	P0C7T7	363 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	C8orf88	P0DMB2	117 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	FCGR2B	P31994	310 aa	Predicted RBP	13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	SUB1	P53999	127 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	BTNL8	Q6UX41	500 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	TMEM170A	Q8WVE7	144 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	TXN2	Q99757	166 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	C7orf50	Q9BRJ6	194 aa	Known RBP	13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	PALMD	Q9NP74	551 aa		13.13	□□□□□ -0.31
CTSB-223	ENST00000532370	IGHV4-30-4	P0DP06	118 aa		13.12	□□□□□ -0.31
CTSB-223	ENST00000532370	TNFRSF9	Q07011	255 aa		13.12	□□□□□ -0.31
CTSB-223	ENST00000532370	GUCA2B	Q16661	112 aa		13.12	□□□□□ -0.31
CTSB-223	ENST00000532370	SBSPON	Q8IVN8	264 aa		13.12	□□□□□ -0.31
CTSB-223	ENST00000532370	TMEM61	Q8N0U2	210 aa		13.12	□□□□□ -0.31

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