RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 GAGE12GP0CL81 117 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GAGE12IP0CL82 117 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 TBPP20226 339 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 PSMB8P28062 276 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CD40LGP29965 261 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GNRHRP30968 328 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 KIR2DS2P43631 304 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CRIP2P52943 208 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 MRPS10P82664 201 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GAGE1Q13065 139 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GAGE4Q13068 117 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CATR1Q13166 79 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 PRSS8Q16651 343 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 PHLDA2Q53GA4 152 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 AKIRIN2Q53H80 203 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 RNASE10Q5GAN6 216 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 VAX1Q5SQQ9 334 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 AADACL3Q5VUY0 350 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 UNQ5815/PRO19632Q6UWF5 114 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 IDO2Q6ZQW0 420 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF818PQ6ZRF7 136 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 LCNL1Q6ZST4 164 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CMTM1Q8IZ96 169 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 VKORC1L1Q8N0U8 176 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 SPAG16Q8N0X2 631 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 LFNGQ8NES3 379 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 VSTM2AQ8TAG5 236 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 DIRAS2Q96HU8 199 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 FAM103A1Q9BTL3 118 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 KLK15Q9H2R5 256 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 KLK11Q9UBX7 282 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 MTFP1Q9UDX5 166 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 RSL24D1Q9UHA3 163 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 FBXO7Q9Y3I1 522 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CSDC2Q9Y534 153 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 NUBP2Q9Y5Y2 271 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 FABP12A6NFH5 140 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 MSGN1A6NI15 193 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 CCL24O00175 119 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 GPR31O00270 319 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 RS1O15537 224 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 RBFOX2O43251 390 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SOX15O60248 233 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 RAMP3O60896 148 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 PGLYRP1O75594 196 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR2A4O95047 310 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 HRASP01112 189 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 CD3DP04234 171 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SAA1P0DJI8 122 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 S100GP29377 79 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 MYCNOSP40205 109 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 TAS2R19P59542 299 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 PLP1P60201 277 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 DGCR2P98153 550 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SSBP1Q04837 148 aaKnown RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 VAMP3Q15836 100 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 TNXAQ16473 311 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 C18orf65Q6ZTR6 163 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 LRTM2Q8N967 370 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 TMEM229BQ8NBD8 167 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 WFDC9Q8NEX5 89 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR51H1Q8NH63 302 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 MARCH1Q8TCQ1 289 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 CASTOR1Q8WTX7 329 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 PHLDA1Q8WV24 401 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 SMIM4Q8WVI0 70 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 PPP1R14BQ96C90 147 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 UBE2E2Q96LR5 201 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR5B12Q96R08 314 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 PHB2Q99623 299 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 FXYD6Q9H0Q3 95 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 RBM38Q9H0Z9 239 aaKnown RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF355PQ9NSJ1 428 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 VSIG4Q9Y279 399 aa4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P42-201ENST00000532126 TEX13DA0A0J9YY54 714 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 hDV102S1A0JD36 115 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 FBLL1A6NHQ2 334 aaKnown RBP4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 G3V4G9 280 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 H3BUA1 57 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 KBTBD11O94819 623 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 RAB3DO95716 219 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 HPRT1P00492 218 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 TRGV3P03979 118 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 CD74P04233 296 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 ANXA3P12429 323 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 PGAM2P15259 253 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 NQO2P16083 231 aa4.47□□□□□ -1.69
HMGB1P42-201ENST00000532126 F2RP25116 425 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms