RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
USF1-210ENST00000531842 LRP1BQ9NZR2 4599 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 ELOA3CA0A087WX78 387 aaPredicted RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 TEX50A0A1B0GTY4 177 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 YIF1AO95070 293 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 KRASP01116 189 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 SERPINE2P07093 398 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 HLA-DMAP28067 261 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 PRSS3P35030 304 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 ADMP35318 185 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 HRH1P35367 487 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 RORCP51449 518 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 POU2AF1Q16633 256 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 THOC7Q6I9Y2 204 aaKnown RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 HSD17B13Q7Z5P4 300 aaPredicted RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 CMTM1Q8IZ96 169 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 DYNC2LI1Q8TCX1 351 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 LSM10Q969L4 123 aaKnown RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 MOB3AQ96BX8 217 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 ZNF2Q9BSG1 426 aaPredicted RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 C6orf62Q9GZU0 229 aaPredicted RBP6.5□□□□□ -1.37
USF1-210ENST00000531842 C21orf62Q9NYP8 219 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 EHFQ9NZC4 300 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 COMMD9Q9P000 198 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 KLK11Q9UBX7 282 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 NSG2Q9Y328 171 aa6.5□□□□□ -1.37
USF1-210ENST00000531842 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 NDUFA4O00483 81 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 PGLYRP1O75594 196 aaPredicted RBP6.49□□□□□ -1.37
USF1-210ENST00000531842 RLN1P04808 185 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 GIG44P09565 113 aaPredicted RBP6.49□□□□□ -1.37
USF1-210ENST00000531842 ZNF182P17025 639 aaPredicted RBP6.49□□□□□ -1.37
USF1-210ENST00000531842 F2RP25116 425 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 LPAR6P43657 344 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 WT1-ASQ06250 92 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 GPR141Q7Z602 305 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 SNX29P2Q8IUI4 249 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 LILRB2Q8N423 598 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 OR4D10Q8NGI6 311 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 SCARB1Q8WTV0 552 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 MRGPRFQ96AM1 343 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 CLEC5AQ9NY25 188 aa6.49□□□□□ -1.37
USF1-210ENST00000531842 F11RQ9Y624 299 aaKnown RBP6.49□□□□□ -1.37
USF1-210ENST00000531842 IGHV3-66A0A0C4DH42 116 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 NUPL2O15504 423 aaKnown RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 IGHV3-48P01763 117 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 APOHP02749 345 aaPredicted RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 FGF2P09038 288 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 G6PCP35575 357 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 RELQ04864 619 aaPredicted RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 RNASE12Q5GAN4 147 aaKnown RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 CLVS1Q8IUQ0 354 aaPredicted RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 OR5H2Q8NGV7 314 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 OR52I2Q8NH67 350 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 FCAMRQ8WWV6 532 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 DGCR14Q96DF8 476 aaKnown RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 MISP3Q96FF7 219 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 SLIRPQ9GZT3 109 aaKnown RBP6.48□□□□□ -1.37
USF1-210ENST00000531842 NDUFA4L2Q9NRX3 87 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 FKBP11Q9NYL4 201 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 PRNDQ9UKY0 176 aa6.48□□□□□ -1.37
USF1-210ENST00000531842 DBX1A6NMT0 343 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 C15orf62A8K5M9 175 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 H3BMQ9 156 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 K7EMT4 169 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 M0QYG6 137 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 CHEK1O14757 476 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 C4BPBP20851 252 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 S100GP29377 79 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
USF1-210ENST00000531842 TAS2R46P59540 309 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 DEFB131AP59861 70 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 TSPAN5P62079 268 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 TMEM187Q14656 261 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 PHLDA2Q53GA4 152 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 LHFPL1Q86WI0 220 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 POM121L12Q8N7R1 296 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 TMEM116Q8NCL8 245 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 OR6F1Q8NGZ6 308 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 OR4A16Q8NH70 328 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 TSC22D3Q99576 134 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 SOSTQ9BQB4 213 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 RHPN1-AS1Q9BWJ2 59 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 RBM38Q9H0Z9 239 aaKnown RBP6.47□□□□□ -1.37
USF1-210ENST00000531842 SCPEP1Q9HB40 452 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 EXTL2Q9UBQ6 330 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 MTFP1Q9UDX5 166 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 SMPXQ9UHP9 88 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 X6R8D5 127 aa6.47□□□□□ -1.37
USF1-210ENST00000531842 TRAV14DV4A0A0A6YYC5 116 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 TRAV10A0A0B4J240 114 aa6.46□□□□□ -1.38
USF1-210ENST00000531842 IGHV7-4-1A0A0J9YVY3 117 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms